RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ARMC8Q8IUR7 673 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 TMEM199Q8N511 208 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 PTGR2Q8N8N7 351 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 ITFG1Q8TB96 612 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 PGAP3Q96FM1 320 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 ZNF560Q96MR9 790 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 TMEM74Q96NL1 305 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 SCUBE2Q9NQ36 999 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 GDAP2Q9NXN4 497 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 SNTG2Q9NY99 539 aa15.46■□□□□ 0.07
CACNA1A-235ENST00000637004 ZFC3H1O60293 1989 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 PMPCBO75439 489 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 LRIG2O94898 1065 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 CYBBP04839 570 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 FYNP06241 537 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 TCF3P15923 654 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 CASP2P42575 452 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 MTHFRP42898 656 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 DIO3P55073 304 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 HIST2H2ACQ16777 129 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 DSG4Q86SJ6 1040 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 ATPAF2Q8N5M1 289 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 ATP6V0D2Q8N8Y2 350 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 PHF10Q8WUB8 498 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 EXT2Q93063 718 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 COLEC11Q9BWP8 271 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 CCDC90BQ9GZT6 254 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 TUBB1Q9H4B7 451 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 SP140LQ9H930 580 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 ZNF638Q14966 1978 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 CITO14578 2027 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 DFFAO00273 331 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 FOXA1P55317 472 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 SF3B4Q15427 424 aaKnown RBP eCLIP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 AKAP14Q86UN6 197 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 WDCPQ9H6R7 721 aa15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 UBQLN1Q9UMX0 589 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-235ENST00000637004 ISPDA4D126 451 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 ASPDHA6ND91 283 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CRCPO75575 148 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SLC22A3O75751 556 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 WISP3O95389 354 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CD4P01730 458 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PCMT1P22061 227 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 OR4D2P58180 307 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CD47Q08722 323 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 ACOX1Q15067 660 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 RANBP10Q6VN20 620 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 LBX2Q6XYB7 198 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 LACC1Q8IV20 430 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 HID1Q8IV36 788 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 LINC01465Q8N7H1 131 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 OR13J1Q8NGT2 312 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 GLMNQ92990 594 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 TXNDC15Q96J42 360 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SIAEQ9HAT2 523 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 AIG1Q9NVV5 245 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 COMMD8Q9NX08 183 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PCDHGB1Q9Y5G3 927 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PTGES3LE9PB15 166 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SLC1A7O00341 560 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 BEST1O76090 585 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 C1RP00736 705 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CHRNA1P02708 482 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PNPLA4P41247 253 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PIGFQ07326 219 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 TIGD2Q4W5G0 525 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PRR23BQ6ZRT6 265 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CILP2Q8IUL8 1156 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SPNS2Q8IVW8 549 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PJA1Q8NG27 643 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 RORBQ92753 470 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 IL12RB2Q99665 862 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 RBM4BQ9BQ04 359 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 RBM4Q9BWF3 364 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 NDEL1Q9GZM8 345 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 BTRCQ9Y297 605 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 MAGED1Q9Y5V3 778 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 DOCK1Q14185 1865 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SYCE1LA8MT33 242 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CLDN5O00501 218 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PIRO00625 290 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PPP6CO00743 305 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 NUAK1O60285 661 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 ANXA6P08133 673 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CCDC159P0C7I6 412 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CHRNA4P43681 627 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 NEK2P51955 445 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 POLR2JP52435 117 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PPP5CP53041 499 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 CTU2Q2VPK5 515 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 TMEM207Q6UWW9 146 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 SVOPLQ8N434 492 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 AADATQ8N5Z0 425 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 OR52K2Q8NGK3 314 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 PTERQ96BW5 349 aa15.44■□□□□ 0.06
CACNA1A-235ENST00000637004 OSBPL10Q9BXB5 764 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms