RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PCSK1NQ9UHG2 260 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PRSS38A1L453 326 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 B4DGG1 531 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 APOC4-APOC2K7ER74 178 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 DFFAO00273 331 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 APOC2P02655 101 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 LIPCP11150 499 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 HGFP14210 728 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 GM2AP17900 193 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 GNGT1P63211 74 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 TFDP2Q14188 446 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 ACOX1Q15067 660 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 TMCO4Q5TGY1 634 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 USP53Q70EK8 1073 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 RFX6Q8HWS3 928 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 HSPH1Q92598 858 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 TLCD1Q96CP7 247 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SGF29Q96ES7 293 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 FAM118BQ9BPY3 351 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 DPEP2Q9H4A9 486 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 MRPL40Q9NQ50 206 aaKnown RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SEPT10Q9P0V9 454 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 RNF215Q9Y6U7 377 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 LRP4O75096 1905 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 ZNF487B1APH4 448 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
CTSD-208ENST00000636843 ZW10O43264 779 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 SOCS5O75159 536 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 TTC4O95801 387 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 SHBGP04278 402 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 NFKBIAP25963 317 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 CD82P27701 267 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 VPS41P49754 854 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 ARSEP51690 589 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 CDH6P55285 790 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 PPP2R2AP63151 447 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 OTUD4Q01804 1114 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 LBRQ14739 615 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 P3H1Q32P28 736 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 PPP6R3Q5H9R7 873 aaPredicted RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 SLITRK4Q8IW52 837 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 NPWQ8N729 165 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 ACTL9Q8TC94 416 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 COQ10AQ96MF6 247 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 LGR4Q9BXB1 951 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 CNOT10Q9H9A5 744 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 PHPT1Q9NRX4 125 aaPredicted RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 CWC15Q9P013 229 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 AKAP7Q9P0M2 348 aaPredicted RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 B4GALT6Q9UBX8 382 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 MOSPD1Q9UJG1 213 aa12.56□□□□□ -0.4
CTSD-208ENST00000636843 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
CTSD-208ENST00000636843 PIEZO2Q9H5I5 2752 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 A8MX80 341 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 SMAPO00193 183 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 HTRA2O43464 458 aaPredicted RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 AGTP01019 485 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 ITGB2P05107 769 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 MYCLP1P12525 358 aaPredicted RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 CCNB1P14635 433 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 ITIH1P19827 911 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 VIPR1P32241 457 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 B4GALNT1Q00973 533 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 DPYSQ14117 519 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 ZNF235Q14590 738 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 TGIF1Q15583 401 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 CLPPQ16740 277 aaPredicted RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 MANEAQ5SRI9 462 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 CYP4V2Q6ZWL3 525 aaPredicted RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 PIM3Q86V86 326 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 CCL4L1Q8NHW4 92 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 NUS1Q96E22 293 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 NSMCE3Q96MG7 304 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 TEX101Q9BY14 249 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 GSDMCQ9BYG8 508 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 PHACTR1Q9C0D0 580 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 CARS2Q9HA77 564 aaKnown RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTSD-208ENST00000636843 TRNAU1APQ9NX07 287 aaKnown RBP12.55□□□□□ -0.4
CTSD-208ENST00000636843 PHTF1Q9UMS5 762 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 PCDHB11Q9Y5F2 797 aa12.55□□□□□ -0.4
CTSD-208ENST00000636843 PRAMEF33A0A0G2JMD5 474 aa12.54□□□□□ -0.4
CTSD-208ENST00000636843 H3BRJ5 948 aa12.54□□□□□ -0.4
CTSD-208ENST00000636843 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
CTSD-208ENST00000636843 RGS16O15492 202 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms