RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 CCL7P80098 99 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 B4GALNT1Q00973 533 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 CYP4F3Q08477 520 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 SQSTM1Q13501 440 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 SPIDRQ14159 915 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 CLPPQ16740 277 aaPredicted RBP15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 C4orf22Q6V702 233 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 SFRP1Q8N474 314 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 DDHD1Q8NEL9 900 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 ZNF398Q8TD17 642 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 PBKQ96KB5 322 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 GFM1Q96RP9 751 aaKnown RBP15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 LRRN3Q9H3W5 708 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 PRKAB1Q9Y478 270 aa15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 URB1O60287 2271 aaKnown RBP15.28■□□□□ 0.04
SRGAP2C-205ENST00000617209 BPTFQ12830 3046 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 A6NCN8 305 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 PRR19A6NJB7 356 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 OR5K4A6NMS3 321 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 B4GAT1O43505 415 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 CEP104O60308 925 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 SUN1O94901 812 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 SLC2A4P14672 509 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 PSMA3P25788 255 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 LSSP48449 732 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 XIAPP98170 497 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 SEMA5AQ13591 1074 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 PTPRCAPQ14761 206 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 KIF26BQ2KJY2 2108 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 KHDC1Q4VXA5 237 aaKnown RBP15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ZNF648Q5T619 568 aaPredicted RBP15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 IYDQ6PHW0 289 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 IGF2-ASQ6U949 168 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 SPRED1Q7Z699 444 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 CCNJLQ8IV13 435 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ZNF547Q8IVP9 402 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 LSMEM2Q8N112 164 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 RASGEF1CQ8N431 466 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 MDM1Q8TC05 714 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 TTC25Q96NG3 672 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 TIMM29Q9BSF4 260 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ZCCHC2Q9C0B9 1178 aaKnown RBP15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 KCNF1Q9H3M0 494 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ETNK1Q9HBU6 452 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 PAK5Q9P286 719 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 TBC1D29Q9UFV1 150 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 TTC7AQ9ULT0 858 aaPredicted RBP15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 PCDHB1Q9Y5F3 818 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 ENTPD2Q9Y5L3 495 aa15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 DNMT3AQ9Y6K1 912 aaPredicted RBP15.27■□□□□ 0.04
SRGAP2C-205ENST00000617209 DSPP15924 2871 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 PKD1L2Q7Z442 2459 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 RHPN2P1A8MT19 583 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 H7C0S8 307 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 PPM1DO15297 605 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 SRP72O76094 671 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 DXOO77932 396 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 IFNB1P01574 187 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 RPLP0P05388 317 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 ACP5P13686 325 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 F3P13726 295 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 ZNF7P17097 686 aaPredicted RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 MSNP26038 577 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 CXCR5P32302 372 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 ZNF140P52738 457 aaPredicted RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 MAZP56270 477 aaKnown RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 SNX1Q13596 522 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 GPRC6AQ5T6X5 926 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 WASH2PQ6VEQ5 465 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 CCDC89Q8N998 374 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 PATE1Q8WXA2 126 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 ZNF514Q96K75 400 aaPredicted RBP15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 POLR1BQ9H9Y6 1135 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 WASH6PQ9NQA3 447 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 KLC4Q9NSK0 619 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 SLC23A2Q9UGH3 650 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
SRGAP2C-205ENST00000617209 KIR2DS5A0A0G2JLQ3 304 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 A0A0G2JNG1 304 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 KLHL33A6NCF5 533 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 SRRM3A6NNA2 597 aaPredicted RBP15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 D6RAR5 112 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 KIR2DS3K7RE56 304 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 CASC3O15234 703 aaKnown RBP15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 MTX2O75431 263 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 PRAMEF1O95521 474 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 CPNE6O95741 557 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 EML2O95834 649 aa15.25■□□□□ 0.03
SRGAP2C-205ENST00000617209 CCKBRP32239 447 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms