RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 THUMPD1Q9NXG2 353 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TAB2Q9NYJ8 693 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KCND2Q9NZV8 630 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KLHL14Q9P2G3 628 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 STOML1Q9UBI4 398 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 USP18Q9UMW8 372 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PLLPQ9Y342 182 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DHRS7Q9Y394 339 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 MAD1L1Q9Y6D9 718 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SPACA6W5XKT8 324 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 EHBP1L1Q8N3D4 1523 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SYNJ1O43426 1573 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PRAG1Q86YV5 1406 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RIMS2Q9UQ26 1411 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 A0A0X1KG70 313 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 A0A1W2PRV1 198 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF729A6NN14 1252 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 EVPLLA8MZ36 301 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KPNA7A9QM74 516 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ARNTLO00327 626 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DDX3XO00571 662 aaKnown RBP eCLIP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TNPO2O14787 897 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TSPAN2O60636 221 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FKTNO75072 461 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CSDE1O75534 798 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 HEXIM1O94992 359 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LDOC1O95751 146 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 IL1AP01583 271 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KRT8P05787 483 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CRHP06850 196 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 OR4E1P0C645 316 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 MYF5P13349 255 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PRF1P14222 555 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DARSP14868 501 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RAB3AP20336 220 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 NR1D1P20393 614 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 HOXC8P31273 242 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 APOBEC3AP31941 199 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RYKP34925 604 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 GPX4P36969 197 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 EIF2DP41214 584 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 MCAMP43121 646 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RPL5P46777 297 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ENTPD1P49961 510 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RAB13P51153 203 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 METAP1P53582 386 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ATP5IP56385 69 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 XIAPP98170 497 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PLAURQ03405 335 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FOLH1Q04609 750 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DLG1Q12959 904 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 NPRL3Q12980 569 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PPIL2Q13356 520 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DYRK1AQ13627 763 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SMAD2Q15796 467 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TWISTNBQ3B726 338 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 NKAIN1Q4KMZ8 207 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SGO1Q5FBB7 561 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 TCHHL1Q5QJ38 904 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 GARNL3Q5VVW2 1013 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LIPNQ5VXI9 398 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PYHIN1Q6K0P9 492 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LETMD1Q6P1Q0 360 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 GGT6Q6P531 493 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 VHLLQ6RSH7 139 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 RBM44Q6ZP01 1051 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 FRA10AC1Q70Z53 315 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 LINC00523Q86TU6 105 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 WFDC8Q8IUA0 241 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ARMC8Q8IUR7 673 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ULK2Q8IYT8 1036 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ABI1Q8IZP0 508 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF248Q8NDW4 579 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 OR5M1Q8NGP8 315 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ZFP28Q8NHY6 868 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DTD1Q8TEA8 209 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 KLHL6Q8WZ60 621 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CPNE4Q96A23 557 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ACSF2Q96CM8 615 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 MVB12AQ96EY5 273 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PGAP3Q96FM1 320 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SIPA1Q96FS4 1042 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PGM2Q96G03 612 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DUS3LQ96G46 650 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PPP1R2P1Q96PQ5 205 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF317Q96PQ6 595 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ZNF184Q99676 751 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PAPOLGQ9BWT3 736 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 DUSP15Q9H1R2 295 aaPredicted RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 CCDC134Q9H6E4 229 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 C11orf49Q9H6J7 331 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 ASB8Q9H765 288 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 PHAXQ9H814 394 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 MINDY3Q9H8M7 445 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 C14orf93Q9H972 538 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SEPSECSQ9HD40 501 aaKnown RBP3.02□□□□□ -1.93
CBWD3-209ENST00000614377 SAYSD1Q9NPB0 183 aa3.02□□□□□ -1.93
CBWD3-209ENST00000614377 IFT46Q9NQC8 304 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms