RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PSMA3P25788 255 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 CDH13P55290 713 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 RPS24P62847 133 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 CYP4F8P98187 520 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 GK3PQ14409 553 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 COQ5Q5HYK3 327 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 LILRA6Q6PI73 481 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 RETREG3Q86VR2 466 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 DHFR2Q86XF0 187 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 HS6ST3Q8IZP7 471 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 OR13C4Q8NGS5 318 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 DDI1Q8WTU0 396 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 LRTOMTQ8WZ04 291 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MRPS31Q92665 395 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 WBP2Q969T9 261 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 KIAA1191Q96A73 305 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 ZUFSPQ96AP4 578 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 DERL2Q9GZP9 239 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 RBM38Q9H0Z9 239 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 MID1IP1Q9NPA3 183 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 ARMC1Q9NVT9 282 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 AGO1Q9UL18 857 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 OBSL1O75147 1896 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 C7orf72A4D263 438 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 H3BMM5 538 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 UBXN8O00124 270 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 CCL16O15467 120 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 PSMC3P17980 439 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MRPL19P49406 292 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 NAA20P61599 178 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 SPATS1Q496A3 300 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 ADGRF1Q5T601 910 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MIER2Q8N344 545 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MINDY1Q8N5J2 469 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 METTL25Q8N6Q8 603 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 MRPL43Q8N983 215 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 GOLM1Q8NBJ4 401 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 OR2T34Q8NGX1 318 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 OR2T3Q8NH03 318 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 SPPL3Q8TCT6 385 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 CORO1BQ9BR76 489 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 HTATIP2Q9BUP3 242 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 COQ10BQ9H8M1 238 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 IL21Q9HBE4 155 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 SYTL2Q9HCH5 934 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 TLR9Q9NR96 1032 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 SDR39U1Q9NRG7 319 aaPredicted RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 NLE1Q9NVX2 485 aaPredicted RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 CHCHD3Q9NX63 227 aaKnown RBP14.59□□□□□ -0.07
CDH1-213ENST00000612417 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 APPL1Q9UKG1 709 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 DENND4CQ5VZ89 1909 aa14.59□□□□□ -0.07
CDH1-213ENST00000612417 LINC01553A4QN01 128 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 PIP5K1BO14986 540 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 VILLO15195 856 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 VPS4BO75351 444 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 OR6B1O95007 311 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 SIX3O95343 332 aaPredicted RBP14.58□□□□□ -0.08
CDH1-213ENST00000612417 STAMBPO95630 424 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 MT-CO1P00395 513 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 HSD17B1P14061 328 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 MYOGP15173 224 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 HOXD9P28356 352 aaPredicted RBP14.58□□□□□ -0.08
CDH1-213ENST00000612417 ZNF140P52738 457 aaPredicted RBP14.58□□□□□ -0.08
CDH1-213ENST00000612417 LCP2Q13094 533 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 GALNT3Q14435 633 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 PTPRCAPQ14761 206 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 ADRM1Q16186 407 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 PFKFB4Q16877 469 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 KIF19Q2TAC6 998 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 BORAQ6PGQ7 559 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 ALDH16A1Q8IZ83 802 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 ANKFN1Q8N957 763 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 SNX31Q8N9S9 440 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 TSPEARQ8WU66 669 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 EXT2Q93063 718 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.58□□□□□ -0.085e-7■■■■■ 55
CDH1-213ENST00000612417 CDKN2AIPNLQ96HQ2 116 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 CNOT6Q9ULM6 557 aaKnown RBP14.58□□□□□ -0.08
CDH1-213ENST00000612417 MED16Q9Y2X0 877 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.08
CDH1-213ENST00000612417 CKMP06732 381 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 BMP2P12643 396 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CDH4P55283 916 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 FOXA1P55317 472 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 ATP6V0D1P61421 351 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 NADK2Q4G0N4 442 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 FAM219BQ5XKK7 198 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 OGFOD2Q6N063 350 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 HMBOX1Q6NT76 420 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 LAYNQ6UX15 382 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 GAREM2Q75VX8 874 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 SPRED2Q7Z698 418 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 CARM1Q86X55 608 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
CDH1-213ENST00000612417 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms