RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 BFSP2Q13515 415 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 NR6A1Q15406 480 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ADRM1Q16186 407 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 MSANTD2Q6P1R3 559 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 BLOC1S3Q6QNY0 202 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 USP50Q70EL3 339 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 DCP1BQ8IZD4 617 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 METTL6Q8TCB7 284 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 TMEM125Q96AQ2 219 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 LINGO1Q96FE5 620 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 HOPXQ9BPY8 73 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 C9orf16Q9BUW7 83 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 THUMPD3Q9BV44 507 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 SARDHQ9UL12 918 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 OAS3Q9Y6K5 1087 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 RPP40O75818 363 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ALBP02768 609 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 RHOQP17081 205 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 TWF1Q12792 350 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 GLYATQ6IB77 296 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ITIH5Q86UX2 942 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 MON1AQ86VX9 555 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ABI1Q8IZP0 508 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 L3HYPDHQ96EM0 354 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 NSMCE3Q96MG7 304 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 TIMMDC1Q9NPL8 285 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ACTR3BQ9P1U1 418 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 CNOT11Q9UKZ1 510 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 MYLKQ15746 1914 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 GNGT2O14610 69 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 CHEK2O96017 543 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 POLR2IP36954 125 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 CCT8P50990 548 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 POLR2JP52435 117 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 RAD51Q06609 339 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 TNK2Q07912 1038 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 C16orf87Q6PH81 154 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 MRM3Q9HC36 420 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 SMPD3Q9NY59 655 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 TCF3P15923 654 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 STC1P52823 247 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 LSM3P62310 102 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 UMODL1-AS1Q8N2C9 162 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 NSMCE2Q96MF7 247 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ARNT2Q9HBZ2 717 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ARMC1Q9NVT9 282 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 LOC285556D6RIA3 1793 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 BNIP3LO60238 219 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 CAPN1P07384 714 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 G6PDP11413 515 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 IDO1P14902 403 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 CTPS1P17812 591 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ZNF33AQ06730 810 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 PTGR1Q14914 329 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ATP6AP1LQ52LC2 224 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ABRAXAS1Q6UWZ7 409 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 LYSMD3Q7Z3D4 306 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 GPR180Q86V85 440 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ZC3H7AQ8IWR0 971 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 TOP1MTQ969P6 601 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 FUBP1Q96AE4 644 aaKnown RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 NPLQ9BXD5 320 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 TLR6Q9Y2C9 796 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 POLR3HQ9Y535 204 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-207ENST00000612273 GPR45Q9Y5Y3 372 aa13.93□□□□□ -0.18
COL6A1-207ENST00000612273 A0A1W2PP18 115 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 H3BMQ9 156 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 TOR1BO14657 336 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 ACOX3O15254 700 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 PSMD8P48556 350 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 HMGCS1Q01581 520 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 ARTNQ5T4W7 220 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 CLDN19Q8N6F1 224 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 SEPT8Q92599 483 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 NCLNQ969V3 563 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 COG8Q96MW5 612 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 OSBPL6Q9BZF3 934 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 PKD2L2Q9NZM6 624 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 IFT80Q9P2H3 777 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-207ENST00000612273 GSNP06396 782 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 ALDH4A1P30038 563 aa13.92□□□□□ -0.18
COL6A1-207ENST00000612273 RFC2P35250 354 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms