RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ENTPD2Q9Y5L3 495 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
LIG1-218ENST00000599322 CAPN6Q9Y6Q1 641 aa13.99□□□□□ -0.17
LIG1-218ENST00000599322 GOLGA6L3A6NEY3 463 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 D6RAR5 112 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 E7EVH7 732 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 NTN3O00634 580 aaPredicted RBP13.98□□□□□ -0.17
LIG1-218ENST00000599322 KCNJ13O60928 360 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 DNAJC6O75061 913 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 CPNE6O95741 557 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 JMJD7P0C870 316 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 RALBP11234 206 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 ZNF8P17098 575 aaPredicted RBP13.98□□□□□ -0.17
LIG1-218ENST00000599322 HADHAP40939 763 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 PCBP4P57723 403 aaKnown RBP13.98□□□□□ -0.17
LIG1-218ENST00000599322 ERVPABLB-1P60509 514 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 TAF1AQ15573 450 aaPredicted RBP13.98□□□□□ -0.17
LIG1-218ENST00000599322 TBC1D25Q3MII6 688 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 BROXQ5VW32 411 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 SPRED1Q7Z699 444 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 LINC00523Q86TU6 105 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 TRIM48Q8IWZ4 208 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 FBXO39Q8N4B4 442 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 ZNF248Q8NDW4 579 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 OR10G6Q8NH81 332 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 CMKLR1Q99788 373 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 TBL1YQ9BQ87 522 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 ARFGAP3Q9NP61 516 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 KCNK4Q9NYG8 393 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 SATB2Q9UPW6 733 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 KCNK6Q9Y257 313 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 PRKAB1Q9Y478 270 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 PCDHGA8Q9Y5G5 932 aa13.98□□□□□ -0.17
LIG1-218ENST00000599322 SMG1Q96Q15 3661 aaKnown RBP13.98□□□□□ -0.17
LIG1-218ENST00000599322 TRBV23OR9-2A0A075B6M9 112 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 KIR2DS5A0A0G2JLQ3 304 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 A0A0G2JNG1 304 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 PDZK1P1A8MUH7 402 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 KIR2DS3K7RE56 304 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 AURKAO14965 403 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 MSH3P20585 1137 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 IDSP22304 550 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 AKT1P31749 480 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 HALP42357 657 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ABCG1P45844 678 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 GPLD1P80108 840 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 TMEM115Q12893 351 aaPredicted RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 LAMB3Q13751 1172 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 KIR2DS5Q14953 304 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ATP13A5Q4VNC0 1218 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 PHF19Q5T6S3 580 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 CRTC3Q6UUV7 619 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 FAM151BQ6UXP7 276 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 RANBP10Q6VN20 620 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ZNF662Q6ZS27 426 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 RAB11FIP2Q7L804 512 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ADGRG6Q86SQ4 1221 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 C17orf82Q86X59 251 aaPredicted RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 TRAPPC5Q8IUR0 188 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 NAGSQ8N159 534 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 CCDC89Q8N998 374 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ZNF398Q8TD17 642 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 PTCD2Q8WV60 388 aaKnown RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 EID2BQ96D98 161 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 DCUN1D1Q96GG9 259 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 LIN37Q96GY3 246 aaPredicted RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 CRELD1Q96HD1 420 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 BBC3Q96PG8 261 aaPredicted RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 APOL2Q9BQE5 337 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 TIMM29Q9BSF4 260 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 IL26Q9NPH9 171 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 KLC4Q9NSK0 619 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
LIG1-218ENST00000599322 PLEKHM1Q9Y4G2 1056 aa13.97□□□□□ -0.17
LIG1-218ENST00000599322 A0A0U1RQJ8 604 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 CFAP99D6REC4 459 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 PLD2O14939 933 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 BUD23O43709 281 aaKnown RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 DXOO77932 396 aaKnown RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 TNFSF15O95150 251 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 IFNB1P01574 187 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 F3P13726 295 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 CCKBRP32239 447 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 CLCNKAP51800 687 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 OR1D5P58170 312 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 HHEXQ03014 270 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 KLF1Q13351 362 aaPredicted RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 CHRNA6Q15825 494 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 MEI1Q5TIA1 1274 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 TMEM164Q5U3C3 297 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 SLC13A5Q86YT5 568 aaPredicted RBP13.96□□□□□ -0.17
LIG1-218ENST00000599322 JAMLQ86YT9 394 aa13.96□□□□□ -0.17
LIG1-218ENST00000599322 OR4K2Q8NGD2 314 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms