RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 UFD1Q92890 307 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 ATP2A3Q93084 1043 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
LINC01538-201ENST00000588074 MSANTD3Q96H12 275 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 NSL1Q96IY1 281 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 ZNF587Q96SQ5 575 aaPredicted RBP5.62□□□□□ -1.51
LINC01538-201ENST00000588074 TMEM246Q9BRR3 403 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 PITPNM3Q9BZ71 974 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 SLC19A3Q9BZV2 496 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 MVB12BQ9H7P6 319 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 SMURF2Q9HAU4 748 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 HMG20AQ9NP66 347 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 SAYSD1Q9NPB0 183 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 RPRD1BQ9NQG5 326 aaKnown RBP5.62□□□□□ -1.51
LINC01538-201ENST00000588074 DNAJC17Q9NVM6 304 aaKnown RBP5.62□□□□□ -1.51
LINC01538-201ENST00000588074 TMEM59LQ9UK28 342 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 HPSEQ9Y251 543 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 GDAQ9Y2T3 454 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 HEMK1Q9Y5R4 338 aaPredicted RBP5.62□□□□□ -1.51
LINC01538-201ENST00000588074 HS3ST4Q9Y661 456 aa5.62□□□□□ -1.51
LINC01538-201ENST00000588074 AGLP35573 1532 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CRYBG1Q9Y4K1 1723 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 LOC100653049A0A140TA62 436 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 PQLC2LA1A4F0 135 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 H0YJX3 145 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 H3BNC9 293 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 TSPAN4O14817 238 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 SLC16A6O15403 523 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ZNF623O75123 536 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 GCATO75600 419 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CDC123O75794 336 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 KRT34O76011 436 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CBX6O95503 412 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 DHFRP00374 187 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ANXA6P08133 673 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ASNSP08243 561 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 SYPP08247 313 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 KRT19P08727 400 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 HBQ1P09105 142 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 HDCP19113 662 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CHRNA5P30532 468 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 THBS2P35442 1172 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 UGT2B10P36537 528 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 HPCAL1P37235 193 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CASP3P42574 277 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 SLC6A9P48067 706 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 MAPK12P53778 367 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ABRQ12979 859 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CAPRIN1Q14444 709 aaKnown RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 NAB2Q15742 525 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 TBCCQ15814 346 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 AANATQ16613 207 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 MDH1BQ5I0G3 518 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 RSBN1Q5VWQ0 802 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 PM20D1Q6GTS8 502 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ANKRD26P1Q6NSI1 321 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 TIGD7Q6NT04 549 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 C11orf88Q6PI97 169 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 KCTD1Q719H9 257 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ZDHHC17Q8IUH5 632 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 LACC1Q8IV20 430 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 EID3Q8N140 333 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CADM2Q8N3J6 435 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 TCP10LQ8TDR4 215 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 GDPD5Q8WTR4 605 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 THAP4Q8WY91 577 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 WASF1Q92558 559 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 ESR2Q92731 530 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 PTP4A1Q93096 173 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 PHACTR3Q96KR7 559 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 MRGPRX4Q96LA9 322 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CCM2Q9BSQ5 444 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 EFHD1Q9BUP0 239 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CDADC1Q9BWV3 514 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 TINAGL1Q9GZM7 467 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 POLR1EQ9GZS1 481 aaKnown RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CAB39LQ9H9S4 337 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 LIN28AQ9H9Z2 209 aaKnown RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 GLTPQ9NZD2 209 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 MAT2BQ9NZL9 334 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 OR6C2Q9NZP2 312 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 FETUBQ9UGM5 382 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CD300AQ9UGN4 299 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CAPN11Q9UMQ6 739 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 COG5Q9UP83 839 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 SNX24Q9Y343 169 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 DIP2CQ9Y2E4 1556 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 KIDINS220Q9ULH0 1771 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 NSD3Q9BZ95 1437 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 MN1Q10571 1320 aaPredicted RBP5.61□□□□□ -1.51
LINC01538-201ENST00000588074 FRMPD4Q14CM0 1322 aa5.61□□□□□ -1.51
LINC01538-201ENST00000588074 CLDN25C9JDP6 229 aa5.6□□□□□ -1.51
LINC01538-201ENST00000588074 H3BM21 787 aa5.6□□□□□ -1.51
LINC01538-201ENST00000588074 H7BY64 318 aa5.6□□□□□ -1.51
LINC01538-201ENST00000588074 J3QRK9 145 aa5.6□□□□□ -1.51
LINC01538-201ENST00000588074 L7N2F9 121 aa5.6□□□□□ -1.51
LINC01538-201ENST00000588074 LILRB5O75023 590 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms