RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DYRK4Q9NR20 520 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 THSD1Q9NS62 852 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SEPT10Q9P0V9 454 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SAMD15Q9P1V8 674 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SIRPGQ9P1W8 387 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
VMP1-204ENST00000587259 NEU3Q9UQ49 428 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 HS3ST2Q9Y278 367 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 TBC1D30Q9Y2I9 924 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 FADS3Q9Y5Q0 445 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 BOD1L1Q8NFC6 3051 aa7.82□□□□□ -1.16
VMP1-204ENST00000587259 SPTY2D1-AS1A0A0U1RR47 76 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 SDR42E2A6NKP2 422 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 SMIM23A6NLE4 172 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 DRGXA6NNA5 263 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CDRT15L2A8MXV6 281 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 K7ENP7 123 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 DFFAO00273 331 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 MATN3O15232 486 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 AQP9O43315 295 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 RAMP2O60895 175 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CLDN11O75508 207 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 MAP3K6O95382 1288 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 METTL18O95568 372 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CSF2P04141 144 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ADRB3P13945 408 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CCNB1P14635 433 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 NME1P15531 152 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 PGAM1P18669 254 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 PSMB4P28070 264 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 RBMS1P29558 406 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 NUDT1P36639 197 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ACVRL1P37023 503 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 MDH1P40925 334 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 SLC19A1P41440 591 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ELK3P41970 407 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 SERPINB9P50453 376 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 NEK3P51956 506 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 GEMP55040 296 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CDH4P55283 916 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 HNRNPKP61978 463 aaKnown RBP eCLIP7.81□□□□□ -1.16
VMP1-204ENST00000587259 CYP4F2P78329 520 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ARF5P84085 180 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 WASHC5Q12768 1159 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 FRG1Q14331 258 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 LONRF1Q17RB8 773 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 LINC00303Q3SY05 128 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 C5orf22Q49AR2 442 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 PRRT3Q5FWE3 981 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 FNBP1LQ5T0N5 605 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 INO80CQ6PI98 192 aaPredicted RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 KYAT3Q6YP21 454 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 ZNF783Q6ZMS7 281 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CCDC81Q6ZN84 652 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 KLHDC8BQ8IXV7 354 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 TMIEQ8NEW7 156 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 EXTL1Q92935 676 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ARHGEF2Q92974 986 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 VOPP1Q96AW1 172 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 STAMBPL1Q96FJ0 436 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 MED8Q96G25 268 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 TEKT5Q96M29 485 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 ZNF599Q96NL3 588 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 SMC6Q96SB8 1091 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 EBNA1BP2Q99848 306 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 LRRC61Q9BV99 259 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 HDAC8Q9BY41 377 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 IL22Q9GZX6 179 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CLPBQ9H078 707 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 SP110Q9HB58 689 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 MBNL1Q9NR56 388 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 GPR27Q9NS67 375 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 NDFIP2Q9NV92 336 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 NSMCE4AQ9NXX6 385 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 NKIRAS1Q9NYS0 192 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 BFARQ9NZS9 450 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 IPO11Q9UI26 975 aaKnown RBP7.81□□□□□ -1.16
VMP1-204ENST00000587259 ZNF180Q9UJW8 692 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 CHMP2BQ9UQN3 213 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 COQ6Q9Y2Z9 468 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 TRPM6Q9BX84 2022 aa7.81□□□□□ -1.16
VMP1-204ENST00000587259 TCRBV9S1A1TA0A576 114 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 EME2A4GXA9 379 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 NEMP2A6NFY4 417 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 RASA4BC9J798 803 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 RASA4O43374 803 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ZMPSTE24O75844 475 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 KRT38O76015 456 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 WISP1O95388 367 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 CD160O95971 181 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 PRNPP04156 253 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 POLBP06746 335 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 GP1BAP07359 652 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 FAM87AP0C7U9 286 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 KRT15P19012 456 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 WT1P19544 449 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 OR1E1P30953 314 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 IGFALSP35858 605 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 MSH2P43246 934 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms