RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 GPR63Q9BZJ6 419 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 LRRN3Q9H3W5 708 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 TRNAU1APQ9NX07 287 aaKnown RBP9.62□□□□□ -0.87
TOP3A-211ENST00000581536 PKD2L2Q9NZM6 624 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 FAM153AQ9UHL3 310 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 AMFRQ9UKV5 643 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 SATB2Q9UPW6 733 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
TOP3A-211ENST00000581536 PKD1L2Q7Z442 2459 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CCDC66A2RUB6 948 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 HACD1B0YJ81 288 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 APOC4-APOC2K7ER74 178 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 MTX2O75431 263 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 IPO7O95373 1038 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 IL2RAP01589 272 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 APOC2P02655 101 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RPLP0P05388 317 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RBP3P10745 1247 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 GLB1P16278 677 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ALDH4A1P30038 563 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ACTR1BP42025 376 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ATP1A2P50993 1020 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 EIF3EP60228 445 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ACTR1AP61163 376 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 GABREP78334 506 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 KIF5AQ12840 1032 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 XRCC4Q13426 336 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 KHDC1Q4VXA5 237 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 C3orf38Q5JPI3 329 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ANKRD20A2Q5SQ80 823 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CERCAMQ5T4B2 595 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CCDC181Q5TID7 509 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ANKRD20A1Q5TYW2 823 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 ANKRD20A3Q5VUR7 823 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 DARS2Q6PI48 645 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RBM44Q6ZP01 1051 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 MICALCLQ6ZW33 695 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 USP53Q70EK8 1073 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 C17orf82Q86X59 251 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 TTC30BQ8N4P2 665 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 IPMKQ8NFU5 416 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 NAT6Q93015 286 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 OR2M4Q96R27 311 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 GSDMCQ9BYG8 508 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 SLC23A2Q9UGH3 650 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RSPH14Q9UHP6 348 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 APPL1Q9UKG1 709 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 R3HDM2Q9Y2K5 976 aaKnown RBP9.61□□□□□ -0.87
TOP3A-211ENST00000581536 CAPN6Q9Y6Q1 641 aa9.61□□□□□ -0.87
TOP3A-211ENST00000581536 RGSL1A5PLK6 1076 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 KCNN4O15554 427 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A9O60656 530 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SLC25A14O95258 325 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-211ENST00000581536 HGFP14210 728 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A6P19224 532 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A1P22309 533 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A4P22310 534 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 PSMB4P28070 264 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A3P35503 534 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A5P35504 534 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 LSSP48449 732 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 CFHR1Q03591 330 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 ILF3Q12906 894 aaKnown RBP eCLIP9.6□□□□□ -0.874e-6■■■■□ 20.7
TOP3A-211ENST00000581536 SPIDRQ14159 915 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SLC1A5Q15758 541 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SLC14A2Q15849 920 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 AMZ1Q400G9 498 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 ZNF574Q6ZN55 896 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SPRED1Q7Z699 444 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 ADGRG6Q86SQ4 1221 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 ZNF761Q86XN6 746 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-211ENST00000581536 RAVER1Q8IY67 606 aaKnown RBP9.6□□□□□ -0.87
TOP3A-211ENST00000581536 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 FGF11Q92914 225 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 GFM1Q96RP9 751 aaKnown RBP9.6□□□□□ -0.87
TOP3A-211ENST00000581536 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 FICDQ9BVA6 458 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 OR2AG1Q9H205 316 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 SEMA6CQ9H3T2 930 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 POLR1BQ9H9Y6 1135 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A7Q9HAW7 530 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A10Q9HAW8 530 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 UGT1A8Q9HAW9 530 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 RDH14Q9HBH5 336 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 ETNK1Q9HBU6 452 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 IL17CQ9P0M4 197 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 TBC1D29Q9UFV1 150 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 TRHDEQ9UKU6 1024 aa9.6□□□□□ -0.87
TOP3A-211ENST00000581536 DNPEPQ9ULA0 475 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms