RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 IL1R2P27930 398 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 CDH6P55285 790 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 UGT8Q16880 541 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 HENMT1Q5T8I9 393 aaKnown RBP18.84■□□□□ 0.61
NDEL1-209ENST00000580738 CACHD1Q5VU97 1274 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 CDKAL1Q5VV42 579 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 PWWP2BQ6NUJ5 590 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 FAM92BQ6ZTR7 304 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 POLNQ7Z5Q5 900 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 AOPEPQ8N6M6 819 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 AVL9Q8NBF6 648 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 NEK11Q8NG66 645 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 KLHL6Q8WZ60 621 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 RSC1A1Q92681 617 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 CSPG4P5Q96PW8 444 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 SLC23A2Q9UGH3 650 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 PCDHGA9Q9Y5G4 932 aaKnown RBP18.84■□□□□ 0.61
NDEL1-209ENST00000580738 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
NDEL1-209ENST00000580738 ARGFXA6NJG6 315 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 MT-ND3P03897 115 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 TCF4P15884 667 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 CLCNKAP51800 687 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 DSC2Q02487 901 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 IL10RAQ13651 578 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 SMTNL2Q2TAL5 461 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 PAPD7Q5XG87 772 aaKnown RBP18.83■□□□□ 0.6
NDEL1-209ENST00000580738 PRSS42Q7Z5A4 293 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 TEX26Q8N6G2 289 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 Q8NA96 180 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 THAP4Q8WY91 577 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 TCTN2Q96GX1 697 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 ING2Q9H160 280 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 OR2AG1Q9H205 316 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 CARD9Q9H257 536 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 FAM83DQ9H4H8 585 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 ZNF106Q9H2Y7 1883 aaKnown RBP18.83■□□□□ 0.6
NDEL1-209ENST00000580738 MED13Q9UHV7 2174 aa18.83■□□□□ 0.6
NDEL1-209ENST00000580738 WIPF3A6NGB9 483 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 NELFEP18615 380 aaKnown RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 PTPN4P29074 926 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 ARL4AP40617 200 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 CAPZBP47756 277 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 SPINT3P49223 89 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 BECN1Q14457 450 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 KCNAB1Q14722 419 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 SEPT7Q16181 437 aaKnown RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 DPYSL2Q16555 572 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 JMJD6Q6NYC1 403 aaPredicted RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 TRIM48Q8IWZ4 208 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 HSPH1Q92598 858 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 SYT11Q9BT88 431 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 TDRD1Q9BXT4 1180 aaKnown RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 MFRPQ9BY79 579 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 POLR1EQ9GZS1 481 aaKnown RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 ACSS2Q9NR19 701 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 DTLQ9NZJ0 730 aa18.82■□□□□ 0.6
NDEL1-209ENST00000580738 ERRFI1Q9UJM3 462 aaPredicted RBP18.82■□□□□ 0.6
NDEL1-209ENST00000580738 C1orf232A0A0U1RR37 186 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 TPM2P07951 284 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 FOLR1P15328 257 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 PPP1CAP62136 330 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 LAMB3Q13751 1172 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 PLA2G4EQ3MJ16 856 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 IRGCQ6NXR0 463 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 CRTC3Q6UUV7 619 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 RAVER1Q8IY67 606 aaKnown RBP18.81■□□□□ 0.6
NDEL1-209ENST00000580738 LPCAT1Q8NF37 534 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 GPR87Q9BY21 358 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 PDE7BQ9NP56 450 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 MAP10Q9P2G4 905 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 DNPEPQ9ULA0 475 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 DNAJC16Q9Y2G8 782 aa18.81■□□□□ 0.6
NDEL1-209ENST00000580738 IGHV5-51A0A0C4DH38 117 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 LDLRP01130 860 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 BRAFP15056 766 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 TUBB3Q13509 450 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 GPR18Q14330 331 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 TDRD12Q587J7 1177 aaKnown RBP18.8■□□□□ 0.6
NDEL1-209ENST00000580738 TXNRD3NBQ6F5E7 133 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 IRF2BP2Q7Z5L9 587 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 SYVN1Q86TM6 617 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 TICAM1Q8IUC6 712 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 ENOX1Q8TC92 643 aaKnown RBP18.8■□□□□ 0.6
NDEL1-209ENST00000580738 SEC14L1Q92503 715 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 C19orf60Q96EN9 201 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 ZDHHC12Q96GR4 267 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 LYSMD1Q96S90 227 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 SLC40A1Q9NP59 571 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 SLAMF7Q9NQ25 335 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.8■□□□□ 0.6
NDEL1-209ENST00000580738 RARRES3Q9UL19 164 aa18.8■□□□□ 0.6
NDEL1-209ENST00000580738 OR52A4PA6NMU1 304 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 PDZK1P1A8MUH7 402 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 KRT86O43790 486 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 FERP16591 822 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 RPL10P27635 214 aaKnown RBP18.79■□□□□ 0.6
NDEL1-209ENST00000580738 PTGIRP43119 386 aa18.79■□□□□ 0.6
NDEL1-209ENST00000580738 RPS15P62841 145 aaKnown RBP18.79■□□□□ 0.6
NDEL1-209ENST00000580738 CHRNA6Q15825 494 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms