RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SPATS2LQ9NUQ6 558 aaKnown RBP24.6■■□□□ 1.53
CDC42EP4-205ENST00000580315 COL6A6A6NMZ7 2263 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 PMS2P1A4D2B8 440 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 CASC3O15234 703 aaKnown RBP24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 DNAJC6O75061 913 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 PPFIA2O75334 1257 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 GLB1P16278 677 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 ADRA1AP35348 466 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 P3H1Q32P28 736 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 CERCAMQ5T4B2 595 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 RANBP10Q6VN20 620 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 TTC9Q92623 222 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 ANP32BQ92688 251 aaKnown RBP24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 TMEM121Q9BTD3 319 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 SYNDIG1Q9H7V2 258 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 TRIM39Q9HCM9 518 aa24.59■■□□□ 1.53
CDC42EP4-205ENST00000580315 CDRT15L2A8MXV6 281 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 GPR89AB7ZAQ6 455 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 J3QKU1 62 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 GPR89BP0CG08 455 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 STIP1P31948 543 aaKnown RBP24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 SPAM1P38567 509 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 BIRC2Q13490 618 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 SPIDRQ14159 915 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 HLTFQ14527 1009 aaKnown RBP eCLIP24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 DTX3LQ8TDB6 740 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 CCDC97Q96F63 343 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 TBL1YQ9BQ87 522 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 APOL2Q9BQE5 337 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 IL17CQ9P0M4 197 aa24.58■■□□□ 1.53
CDC42EP4-205ENST00000580315 RP1P56715 2156 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 PIEZO2Q9H5I5 2752 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 C2orf81A6NN90 581 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 STX7O15400 261 aaKnown RBP24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 NUDT21O43809 227 aaKnown RBP24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 NUAK1O60285 661 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 PNLIPP16233 465 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 LY6DQ14210 128 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 FOXR1Q6PIV2 292 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 CHST15Q7LFX5 561 aaPredicted RBP24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 ATG4AQ8WYN0 398 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 VPS35Q96QK1 796 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 OR2AG1Q9H205 316 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 LRIT1Q9P2V4 623 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 ATXN10Q9UBB4 475 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 FEZ2Q9UHY8 353 aaPredicted RBP24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 APPL1Q9UKG1 709 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 PLEKHM1Q9Y4G2 1056 aa24.57■■□□□ 1.52
CDC42EP4-205ENST00000580315 K7ENP7 123 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 ZW10O43264 779 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 GRID2O43424 1007 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 LIASO43766 372 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 PDX1P52945 283 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 GDF10P55107 478 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 PDE1BQ01064 536 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 TAF1AQ15573 450 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 INO80CQ6PI98 192 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 ARL14Q8N4G2 192 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 WDR36Q8NI36 951 aaKnown RBP24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 GDAP1Q8TB36 358 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 GFM1Q96RP9 751 aaKnown RBP24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 LRRC40Q9H9A6 602 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 ARFGAP3Q9NP61 516 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 IL26Q9NPH9 171 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 PRKAB1Q9Y478 270 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 ST14Q9Y5Y6 855 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 RNF215Q9Y6U7 377 aa24.56■■□□□ 1.52
CDC42EP4-205ENST00000580315 GLYATL1P3A0A0U1RQE8 302 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 PSMD3O43242 534 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 BUD23O43709 281 aaKnown RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 VEGFDO43915 354 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 TNFSF15O95150 251 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 ECEL1O95672 775 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 CRTAMO95727 393 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 RPLP0P05388 317 aaKnown RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 ZNF8P17098 575 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 LPOP22079 712 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 MLLT3P42568 568 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 ATP13A5Q4VNC0 1218 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 CLEC14AQ86T13 490 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 C17orf82Q86X59 251 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 SFTPA2Q8IWL1 248 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 KLHDC8BQ8IXV7 354 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 BRSK1Q8TDC3 778 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 MAIP1Q8WWC4 291 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 RTP4Q96DX8 246 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 RABGEF1Q9UJ41 708 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 ZNF148Q9UQR1 794 aa24.55■■□□□ 1.52
CDC42EP4-205ENST00000580315 RHPN2P1A8MT19 583 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 METTL18O95568 372 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 ACP5P13686 325 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 MAZP56270 477 aaKnown RBP24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 OLIG2Q13516 323 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 ITGA9Q13797 1035 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 SPARCL1Q14515 664 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 OASLQ15646 514 aaKnown RBP24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 ZNF648Q5T619 568 aaPredicted RBP24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 FAM151BQ6UXP7 276 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 ADGRG6Q86SQ4 1221 aa24.54■■□□□ 1.52
CDC42EP4-205ENST00000580315 CCNJLQ8IV13 435 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms