RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ZNF572Q7Z3I7 529 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 ADGRG6Q86SQ4 1221 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 GLRX5Q86SX6 157 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 LRRTM4Q86VH4 590 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 FAM181AQ8N9Y4 354 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 MNS1Q8NEH6 495 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 SNF8Q96H20 258 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 CLPBQ9H078 707 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 UGT1A7Q9HAW7 530 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 UGT1A10Q9HAW8 530 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 UGT1A8Q9HAW9 530 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 APOBEC2Q9Y235 224 aaKnown RBP12.63□□□□□ -0.39
TRAPPC1-206ENST00000573989 TCRBV7S3A2A0A539 114 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CCDC78A2IDD5 438 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 SDR42E2A6NKP2 422 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 GAPDHSO14556 408 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 KMOO15229 486 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 DNAJC6O75061 913 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CDK4P11802 303 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZNF8P17098 575 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CKMT2P17540 419 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 PAMP19021 973 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 PSMA3P25788 255 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 MGAT1P26572 445 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 SIM1P81133 766 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CTBSQ01459 385 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 MORF4L2Q15014 288 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 GPRC6AQ5T6X5 926 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 RNASEH2BQ5TBB1 312 aaKnown RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 LYPLAL1Q5VWZ2 237 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 ANKRD22Q5VYY1 191 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 IZUMO3Q5VZ72 239 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 AFTPHQ6ULP2 937 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CHST15Q7LFX5 561 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 TAS2R42Q7RTR8 314 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 FAM46DQ8NEK8 389 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 OR6P1Q8NGX9 317 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 GPBAR1Q8TDU6 330 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 APOLD1Q96LR9 279 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 COPS8Q99627 209 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 ARFGAP3Q9NP61 516 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 CHRAC1Q9NRG0 131 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 GPR34Q9UPC5 381 aa12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 UTP11Q9Y3A2 253 aaKnown RBP12.62□□□□□ -0.39
TRAPPC1-206ENST00000573989 KLHL33A6NCF5 533 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 F8W8V4 182 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TRIM38O00635 465 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 CHUKO15111 745 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 PFDN6O15212 129 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 KCNJ13O60928 360 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 MTX2O75431 263 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TMEM63AO94886 807 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 FUCA1P04066 466 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 SLC2A4P14672 509 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACTR1BP42025 376 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACTR1AP61163 376 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACVR1Q04771 509 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 NR0B2Q15466 257 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TCEA2Q15560 299 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 INSCQ1MX18 579 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 DNAJC21Q5F1R6 531 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 AARS2Q5JTZ9 985 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 SLC30A9Q6PML9 568 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZNF534Q76KX8 674 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ERMP1Q7Z2K6 904 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TRAPPC5Q8IUR0 188 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 NXPE1Q8N323 547 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 ARL10Q8N8L6 244 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 OR13J1Q8NGT2 312 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 OR4L1Q8NH43 312 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 HDAC10Q969S8 669 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 KIFC1Q9BW19 673 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 BOCQ9BWV1 1114 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 RAB17Q9H0T7 212 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 DPEP2Q9H4A9 486 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 SYBUQ9NX95 663 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 TMPRSS11EQ9UL52 423 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 DNMT3AQ9Y6K1 912 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 PIKFYVEQ9Y2I7 2098 aa12.61□□□□□ -0.39
TRAPPC1-206ENST00000573989 QSOX1O00391 747 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 CCL22O00626 93 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 GIPC1O14908 333 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 AVILO75366 819 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms