RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 OR2M4Q96R27 311 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 LRRC61Q9BV99 259 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GSDMCQ9BYG8 508 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 TCEAL2Q9H3H9 227 aaPredicted RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 CCDC86Q9H6F5 360 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 ASB8Q9H765 288 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 MRPL40Q9NQ50 206 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 RRAGDQ9NQL2 400 aaPredicted RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 SMOXQ9NWM0 555 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 PIH1D1Q9NWS0 290 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 FKBPLQ9UIM3 349 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 PNMA8BQ9ULN7 279 aaPredicted RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 APOBEC2Q9Y235 224 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 BTBD3Q9Y2F9 522 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GPSM3Q9Y4H4 160 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 KCTD3Q9Y597 815 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 ACACAQ13085 2346 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GCN1Q92616 2671 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 MAGEB16A2A368 324 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 FAM187AA6NFU0 413 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 DNALI1O14645 258 aaPredicted RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 YY2O15391 372 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 FFAR2O15552 330 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 NUAK1O60285 661 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A9O60656 530 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 DNAJC6O75061 913 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 RALBP11234 206 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A6P19224 532 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A1P22309 533 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A4P22310 534 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A3P35503 534 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A5P35504 534 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 PTGIRP43119 386 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 POLD2P49005 469 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 RPIAP49247 311 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TERF1P54274 439 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 SESN2P58004 480 aaPredicted RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 XIAPP98170 497 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TMEM115Q12893 351 aaPredicted RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 NFATC2Q13469 925 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 LRP8Q14114 963 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 PTPRCAPQ14761 206 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 GPR33Q49SQ1 333 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 PYCR3Q53H96 274 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TSTD2Q5T7W7 516 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 ZCCHC8Q6NZY4 707 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 ZNF572Q7Z3I7 529 aaPredicted RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 SNX20Q7Z614 316 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 RAB44Q7Z6P3 723 aaPredicted RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 TAF8Q7Z7C8 310 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 ADGRG6Q86SQ4 1221 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 PDZD3Q86UT5 571 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TRIM74Q86UV6 250 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 HOOK3Q86VS8 718 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 DDHD1Q8NEL9 900 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 GPBAR1Q8TDU6 330 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD3-216ENST00000573936 DNAJC1Q96KC8 554 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 KRT12Q99456 494 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TTC1Q99614 292 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 CLPBQ9H078 707 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TMEM168Q9H0V1 697 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A7Q9HAW7 530 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A10Q9HAW8 530 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 UGT1A8Q9HAW9 530 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 MRM3Q9HC36 420 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 ATXN10Q9UBB4 475 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 ZNHIT2Q9UHR6 403 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 CRLS1Q9UJA2 301 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 TCAF1Q9Y4C2 921 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 MRFAP1Q9Y605 127 aa10.91□□□□□ -0.66
CHD3-216ENST00000573936 OAS3Q9Y6K5 1087 aaKnown RBP10.91□□□□□ -0.66
CHD3-216ENST00000573936 TMEM131Q92545 1883 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 TCRBV7S3A2A0A539 114 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 AGAP14A8MT82 685 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 GAPDHSO14556 408 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 KMOO15229 486 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 GRID2O43424 1007 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 SIGLEC6O43699 453 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 KCNJ13O60928 360 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 CDK14O94921 469 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 FUCA1P04066 466 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 FTH1P19P0C7X4 201 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 GIMD1P0DJR0 217 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 CDK4P11802 303 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 ZNF8P17098 575 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 CKMT2P17540 419 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 MSH3P20585 1137 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 MC4RP32245 332 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 PPARGP37231 505 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 CACNG1Q06432 222 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 COL28A1Q2UY09 1125 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 DEFB133Q30KQ1 61 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 CCDC38Q502W7 563 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms