RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	LPO	P22079	712 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	IDS	P22304	550 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	AKT1	P31749	480 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	STIP1	P31948	543 aa	Known RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	CSTF2	P33240	577 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	HADHA	P40939	763 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	HAL	P42357	657 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	FASLG	P48023	281 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	LMAN1	P49257	510 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	OR1D5	P58170	312 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	TMEM115	Q12893	351 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	KIR2DS5	Q14953	304 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	KDELC1	Q6UW63	502 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	USP53	Q70EK8	1073 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	TRAPPC5	Q8IUR0	188 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	DTX3L	Q8TDB6	740 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	ALG3	Q92685	438 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	OXNAD1	Q96HP4	312 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	NAF1	Q96HR8	494 aa	Known RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	SPATA13	Q96N96	652 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	WDR24	Q96S15	920 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	TBL1Y	Q9BQ87	522 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	CNOT6	Q9ULM6	557 aa	Known RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	KCNK6	Q9Y257	313 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	PRKAB1	Q9Y478	270 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	PLEKHM1	Q9Y4G2	1056 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	PCDHB11	Q9Y5F2	797 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	OAS3	Q9Y6K5	1087 aa	Known RBP	10.25	□□□□□ -0.77
UBR1-207	ENST00000568782	IGF2R	P11717	2491 aa		10.25	□□□□□ -0.77
UBR1-207	ENST00000568782		E7EVH7	732 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	KLK10	O43240	276 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TLX3	O43711	291 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	AGT	P01019	485 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	VIP	P01282	170 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF7	P17097	686 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF8	P17098	575 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	PSMB4	P28070	264 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A5	P35504	534 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	CHRNA4	P43681	627 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	CLCNKA	P51800	687 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	B4GALNT1	Q00973	533 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	RPS6KA1	Q15418	735 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TAF1A	Q15573	450 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	LONRF2	Q1L5Z9	754 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	PARP6	Q2NL67	630 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ATP13A5	Q4VNC0	1218 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	FAM182A	Q5T1J6	154 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	IYD	Q6PHW0	289 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	CRTC3	Q6UUV7	619 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	FAM151B	Q6UXP7	276 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF438	Q7Z4V0	828 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ADGRG6	Q86SQ4	1221 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	LINC00523	Q86TU6	105 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	PDZD3	Q86UT5	571 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	C17orf82	Q86X59	251 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TMEM139	Q8IV31	216 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	SFRP1	Q8N474	314 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	CCDC110	Q8TBZ0	833 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	SLC37A2	Q8TED4	501 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	MAIP1	Q8WWC4	291 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ANP32B	Q92688	251 aa	Known RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	EID2B	Q96D98	161 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	DCUN1D1	Q96GG9	259 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	HES6	Q96HZ4	224 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF514	Q96K75	400 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	FAM118B	Q9BPY3	351 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TIMM29	Q9BSF4	260 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	EPB41L1	Q9H4G0	881 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	C10orf88	Q9H8K7	445 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	RDH14	Q9HBH5	336 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ARFGAP3	Q9NP61	516 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	SARS2	Q9NP81	518 aa	Known RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	IL17C	Q9P0M4	197 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	TRIM10	Q9UDY6	481 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	PISD	Q9UG56	409 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF148	Q9UQR1	794 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	DNAJC16	Q9Y2G8	782 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	LOXL2	Q9Y4K0	774 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	SPO11	Q9Y5K1	396 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	ADGRG1	Q9Y653	693 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	USP24	Q9UPU5	2620 aa		10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.24	□□□□□ -0.77
UBR1-207	ENST00000568782	FREM2	Q5SZK8	3169 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	KLHL33	A6NCF5	533 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	CFAP99	D6REC4	459 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	HGS	O14964	777 aa	Predicted RBP	10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	AURKA	O14965	403 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	PPM1D	O15297	605 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	B4GAT1	O43505	415 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	AMD1	P17707	334 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	MAPK9	P45984	424 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	MAPK10	P53779	464 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	TMPRSS3	P57727	454 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	ZFP36L1	Q07352	338 aa	Known RBP	10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	NFATC2	Q13469	925 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	LAMB3	Q13751	1172 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms