RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 OR2AG1Q9H205 316 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 EIF2B3Q9NR50 452 aaKnown RBP12.14□□□□□ -0.47
FANCA-229ENST00000567988 TRMT1Q9NXH9 659 aaKnown RBP12.14□□□□□ -0.47
FANCA-229ENST00000567988 PAK5Q9P286 719 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 SLC23A2Q9UGH3 650 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 FKBPLQ9UIM3 349 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 PRKAB1Q9Y478 270 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 CHD6Q8TD26 2715 aa12.14□□□□□ -0.47
FANCA-229ENST00000567988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 PSMD3O43242 534 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 GRID2O43424 1007 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 MTX2O75431 263 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 TCEA3O75764 348 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 SLC25A14O95258 325 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 PRAMEF1O95521 474 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 MT-CO3P00414 261 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 IFNB1P01574 187 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 PROS1P07225 676 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 GLB1P16278 677 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 ACTR1BP42025 376 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 FASLGP48023 281 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 CTSCP53634 463 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 ACTR1AP61163 376 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 TMEM115Q12893 351 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 TARDBPQ13148 414 aaKnown RBP eCLIP12.13□□□□□ -0.47
FANCA-229ENST00000567988 NFATC2Q13469 925 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 LONRF2Q1L5Z9 754 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 GPRC6AQ5T6X5 926 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 SLC30A9Q6PML9 568 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 ARL14Q8N4G2 192 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 OR13J1Q8NGT2 312 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 ZDHHC1Q8WTX9 485 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 GLMNQ92990 594 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 CCDC74AQ96AQ1 378 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 RANBP9Q96S59 729 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 TIMM29Q9BSF4 260 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 RAB6BQ9NRW1 208 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
FANCA-229ENST00000567988 SMARCAL1Q9NZC9 954 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 SIRPGQ9P1W8 387 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 TBC1D29Q9UFV1 150 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 MOSPD1Q9UJG1 213 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 RIMKLBQ9ULI2 386 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
FANCA-229ENST00000567988 CPED1A4D0V7 1026 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 B4DGG1 531 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 TAF4O00268 1085 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 SRP72O76094 671 aaKnown RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 ECEL1O95672 775 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 CRTAMO95727 393 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 TPH1P17752 444 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 TNNT3P45378 269 aaPredicted RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 ARSDP51689 593 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 PDE1BQ01064 536 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 DMPKQ09013 629 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 CDH17Q12864 832 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 SQSTM1Q13501 440 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 ITGA9Q13797 1035 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 RTP5Q14D33 572 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 LDLRAP1Q5SW96 308 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 TMPRSS9Q7Z410 1059 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 SPRED1Q7Z699 444 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 LINC00523Q86TU6 105 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 RASGEF1AQ8N9B8 481 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 MAPK15Q8TD08 544 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 ZNF398Q8TD17 642 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 DNAJC1Q96KC8 554 aaKnown RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 PIH1D1Q9NWS0 290 aaKnown RBP12.12□□□□□ -0.47
FANCA-229ENST00000567988 CLCA2Q9UQC9 943 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 GPSM3Q9Y4H4 160 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 PCDHB1Q9Y5F3 818 aa12.12□□□□□ -0.47
FANCA-229ENST00000567988 ZFC3H1O60293 1989 aaKnown RBP12.11□□□□□ -0.47
FANCA-229ENST00000567988 TCRBV7S3A2A0A539 114 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 TMEM8BA6NDV4 472 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 D6RAR5 112 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 PGRMC1O00264 195 aaKnown RBP12.11□□□□□ -0.47
FANCA-229ENST00000567988 ZNF185O15231 689 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 PPM1DO15297 605 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 B4GAT1O43505 415 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 KIF5CO60282 957 aa12.11□□□□□ -0.47
FANCA-229ENST00000567988 CDK14O94921 469 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms