RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 GPR87Q9BY21 358 aa14.35□□□□□ -0.11
VAC14-206ENST00000564685 POLR1EQ9GZS1 481 aaKnown RBP14.35□□□□□ -0.11
VAC14-206ENST00000564685 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
VAC14-206ENST00000564685 FAM83DQ9H4H8 585 aa14.35□□□□□ -0.11
VAC14-206ENST00000564685 SCHIP1Q9P0W5 487 aaPredicted RBP14.35□□□□□ -0.11
VAC14-206ENST00000564685 ATXN10Q9UBB4 475 aa14.35□□□□□ -0.11
VAC14-206ENST00000564685 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
VAC14-206ENST00000564685 PCDHGA9Q9Y5G4 932 aaKnown RBP14.35□□□□□ -0.11
VAC14-206ENST00000564685 ANKRD17O75179 2603 aaKnown RBP14.34□□□□□ -0.11
VAC14-206ENST00000564685 C1orf232A0A0U1RR37 186 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 TCP11X1B4DZS4 312 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 FERP16591 822 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 SERPINB6P35237 376 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 DCTP40126 519 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 SLC19A1P41440 591 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 SPINT3P49223 89 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 CHAF1BQ13112 559 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 DPYSL2Q16555 572 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 SMTNL2Q2TAL5 461 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 HENMT1Q5T8I9 393 aaKnown RBP14.34□□□□□ -0.11
VAC14-206ENST00000564685 CYB5D1Q6P9G0 228 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 FAM92BQ6ZTR7 304 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
VAC14-206ENST00000564685 KLHL6Q8WZ60 621 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 HSPH1Q92598 858 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 ZDHHC12Q96GR4 267 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 CSPG4P5Q96PW8 444 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 OR2AG1Q9H205 316 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 PDE7BQ9NP56 450 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 MLXIPLQ9NP71 852 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 ACSS2Q9NR19 701 aa14.34□□□□□ -0.11
VAC14-206ENST00000564685 ZNF624Q9P2J8 865 aaPredicted RBP14.34□□□□□ -0.11
VAC14-206ENST00000564685 ARGFXA6NJG6 315 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 PDZK1P1A8MUH7 402 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 MTA2O94776 668 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 TIAF1O95411 115 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 ZNF8P17098 575 aaPredicted RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 CES1P23141 567 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 IL1R2P27930 398 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 PTPN4P29074 926 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 CAPZBP47756 277 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RPL26P61254 145 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 RPS18P62269 152 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 RPS15P62841 145 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 DSC2Q02487 901 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 IHHQ14623 411 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 BOLA3Q53S33 107 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 PRR30Q53SZ7 412 aaPredicted RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 PAPD7Q5XG87 772 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 PWWP2BQ6NUJ5 590 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 IRGCQ6NXR0 463 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 PRR7Q8TB68 274 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RSC1A1Q92681 617 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 TDRD1Q9BXT4 1180 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 SLC29A3Q9BZD2 475 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 ING2Q9H160 280 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 AKIRIN1Q9H9L7 192 aaPredicted RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 SLAMF7Q9NQ25 335 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.12
VAC14-206ENST00000564685 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 MAP10Q9P2G4 905 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RARRES3Q9UL19 164 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RPL26L1Q9UNX3 145 aaKnown RBP14.33□□□□□ -0.12
VAC14-206ENST00000564685 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
VAC14-206ENST00000564685 RGSL1A5PLK6 1076 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 SLC25A14O95258 325 aaPredicted RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 PRLP01236 227 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 CA4P22748 312 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 PCK1P35558 622 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 UBXN1Q04323 297 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 TUBB3Q13509 450 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 CHRNA6Q15825 494 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 SEPT7Q16181 437 aaKnown RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 INSCQ1MX18 579 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 ANKRD20A8PQ5CZ79 823 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 ZNF648Q5T619 568 aaPredicted RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 JMJD6Q6NYC1 403 aaPredicted RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 FAM199XQ6PEV8 388 aaPredicted RBP14.32□□□□□ -0.12
VAC14-206ENST00000564685 CRTC3Q6UUV7 619 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 IRF2BP2Q7Z5L9 587 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 SYVN1Q86TM6 617 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 LRRC49Q8IUZ0 686 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 LPCAT1Q8NF37 534 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 FCRL4Q96PJ5 515 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 LYSMD1Q96S90 227 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 SYT11Q9BT88 431 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 PCDH9Q9HC56 1237 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 TRIM39Q9HCM9 518 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 LUZP4Q9P127 313 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 EPHA6Q9UF33 1036 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 SLC23A2Q9UGH3 650 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 DNAJC16Q9Y2G8 782 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 ZNF451Q9Y4E5 1061 aa14.32□□□□□ -0.12
VAC14-206ENST00000564685 TTLL3Q9Y4R7 772 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms