RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CRYL1Q9Y2S2 319 aa9.64□□□□□ -0.87
UBFD1-202ENST00000563366 PRRC2BQ5JSZ5 2229 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ATXN2Q99700 1313 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TCF20Q9UGU0 1960 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 COL4A2P08572 1712 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TRBV5-4A0A0C4DH59 114 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 WDR91A4D1P6 747 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 AGAP14A8MT82 685 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PRRT4C9JH25 899 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 E5RI56 91 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ANHXE9PGG2 379 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TRIM24O15164 1050 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PHGDHO43175 533 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SNX3O60493 162 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 RNASEH1O60930 286 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TGDSO95455 350 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CLDN7O95471 211 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SERPINE1P05121 402 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 MYL2P10916 166 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PKMP14618 531 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 RPS3P23396 243 aaKnown RBP eCLIP9.63□□□□□ -0.871e-12■■□□□ 13.1
UBFD1-202ENST00000563366 ITGB7P26010 798 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 LTBRP36941 435 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SERPINB5P36952 375 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TNFRSF4P43489 277 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ABCG1P45844 678 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SLC6A11P48066 632 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ATP6V0D1P61421 351 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 XIAPP98170 497 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PPARDQ03181 441 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 DLX2Q07687 328 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 HTR4Q13639 388 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF234Q14588 700 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PTPRCAPQ14761 206 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PCLAFQ15004 111 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ACAP2Q15057 778 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CRY1Q16526 586 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CDKN3Q16667 212 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 RBM20Q5T481 1227 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 LRRC8EQ6NSJ5 796 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CRTC1Q6UUV9 634 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 DPPA4Q7L190 304 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TAS2R42Q7RTR8 314 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CEP97Q8IW35 865 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 NKAPQ8N5F7 415 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PPP4R1Q8TF05 950 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SORCS1Q8WY21 1168 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 RAB7BQ96AH8 199 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 MSANTD3Q96H12 275 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 SCYL1Q96KG9 808 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 UBXN10Q96LJ8 280 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 NDNQ99608 321 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 C1QTNF1Q9BXJ1 281 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TRIM55Q9BYV6 548 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CLPBQ9H078 707 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 TMEM245Q9H330 911 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 ASB8Q9H765 288 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 FBRSQ9HAH7 460 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 BPIFA1Q9NP55 256 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 THAP1Q9NVV9 213 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 KCTD5Q9NXV2 234 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 GTSE1Q9NYZ3 720 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 KLHL14Q9P2G3 628 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 THAP10Q9P2Z0 257 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CDH22Q9UJ99 828 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 GNPTGQ9UJJ9 305 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 EMCNQ9ULC0 261 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 FNDC3AQ9Y2H6 1198 aaKnown RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-202ENST00000563366 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 CKAP5Q14008 2032 aa9.63□□□□□ -0.87
UBFD1-202ENST00000563366 PLXNB3Q9ULL4 1909 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ERICH4A6NGS2 130 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 OTOL1A6NHN0 477 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 C16orf96A6NNT2 1141 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 TMEM114B3SHH9 223 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ARNTLO00327 626 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 QSOX1O00391 747 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 KPNA3O00505 521 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 RHOBTB1O94844 696 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 KIAA0754O94854 1291 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 FAM157BP0CG42 384 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 CCDC166P0CW27 439 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 RALBP11234 206 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 ZNF37AP17032 561 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-202ENST00000563366 BPIP17213 487 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 BGNP21810 368 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 MMP12P39900 470 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 NSG1P42857 185 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 HK2P52789 917 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 NAA20P61599 178 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 IRF9Q00978 393 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 DMTNQ08495 405 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 STX3Q13277 289 aa9.62□□□□□ -0.87
UBFD1-202ENST00000563366 SMAD4Q13485 552 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms