RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 CARS2Q9HA77 564 aaKnown RBP13.3□□□□□ -0.28
SPG7-207ENST00000563218 ETNK2Q9NVF9 386 aa13.3□□□□□ -0.28
SPG7-207ENST00000563218 ASIC3Q9UHC3 531 aa13.3□□□□□ -0.28
SPG7-207ENST00000563218 IL17BQ9UHF5 180 aa13.3□□□□□ -0.28
SPG7-207ENST00000563218 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
SPG7-207ENST00000563218 ESYT3A0FGR9 886 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CFAP69A5D8W1 941 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 ARHGAP42A6NI28 874 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 BHMG1C9JSJ3 638 aaPredicted RBP13.29□□□□□ -0.28
SPG7-207ENST00000563218 NUDT21O43809 227 aaKnown RBP13.29□□□□□ -0.28
SPG7-207ENST00000563218 MFSD11O43934 449 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 KRT14P02533 472 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 ITGB2P05107 769 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 FGF1P05230 155 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CCNB1P14635 433 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 PNLIPP16233 465 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CSF2RBP32927 897 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CSNK1DP48730 415 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CSRP3P50461 194 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 GBE1Q04446 702 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 BCL2L1Q07817 233 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 NKAIN2Q5VXU1 208 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 DENND2CQ68D51 928 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 PNCKQ6P2M8 343 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 FBXO38Q6PIJ6 1188 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 ZNF438Q7Z4V0 828 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 HEATR4Q86WZ0 1026 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 C17orf82Q86X59 251 aaPredicted RBP13.29□□□□□ -0.28
SPG7-207ENST00000563218 PGBD5Q8N414 524 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CCDC89Q8N998 374 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 GPBAR1Q8TDU6 330 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 ZDHHC1Q8WTX9 485 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 NUS1Q96E22 293 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 CCDC74BQ96LY2 380 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 TMEM121Q9BTD3 319 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 SP110Q9HB58 689 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 DTLQ9NZJ0 730 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 TMEM9Q9P0T7 183 aa13.29□□□□□ -0.28
SPG7-207ENST00000563218 IGHV5-10-1A0A0J9YXX1 117 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 HACD1B0YJ81 288 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 TNFRSF10CO14798 259 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 PPP1R12AO14974 1030 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 SUV39H1O43463 412 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 CEACAM5P06731 702 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 HOXC4P09017 264 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 FGF3P11487 239 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 LHCGRP22888 699 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 MPSTP25325 297 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 ALDH4A1P30038 563 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 STIP1P31948 543 aaKnown RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 ETV3P41162 512 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 GNPDA1P46926 289 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 POLD2P49005 469 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 CARSP49589 748 aaKnown RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 SCNN1BP51168 640 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 SLC10A7Q0GE19 358 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 SLC10A2Q12908 348 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 PDK1Q15118 436 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 TRIP13Q15645 432 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 SLC30A9Q6PML9 568 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 RFLNAQ6ZTI6 216 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 ZNF761Q86XN6 746 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 PAF1Q8N7H5 531 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 SEC14L1Q92503 715 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 SMIM14Q96QK8 99 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 CMKLR1Q99788 373 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 FRMD8Q9BZ67 464 aaPredicted RBP13.28□□□□□ -0.28
SPG7-207ENST00000563218 PCDH9Q9HC56 1237 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 TAAR2Q9P1P5 351 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 SNX24Q9Y343 169 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 NEU2Q9Y3R4 380 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 PCDHGC4Q9Y5F7 938 aa13.28□□□□□ -0.28
SPG7-207ENST00000563218 TNRC6AQ8NDV7 1962 aaKnown RBP13.27□□□□□ -0.28
SPG7-207ENST00000563218 MAP3K6O95382 1288 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 CPNE6O95741 557 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 IFNB1P01574 187 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 CD1CP29017 333 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 ADCY8P40145 1251 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
SPG7-207ENST00000563218 VPS41P49754 854 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 CALCOCO2Q13137 446 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 NR1D2Q14995 579 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 HSD11B1LQ7Z5J1 315 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 TSPAN33Q86UF1 283 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 PIM3Q86V86 326 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 PTRH1Q86Y79 214 aaKnown RBP13.27□□□□□ -0.29
SPG7-207ENST00000563218 NAGSQ8N159 534 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 LZTR1Q8N653 840 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 BBOF1Q8ND07 529 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 PDCD6IPQ8WUM4 868 aaKnown RBP13.27□□□□□ -0.29
SPG7-207ENST00000563218 TFB1MQ8WVM0 346 aaKnown RBP13.27□□□□□ -0.29
SPG7-207ENST00000563218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms