RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GPBAR1Q8TDU6 330 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 NAT6Q93015 286 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 DCUN1D1Q96GG9 259 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 DNAJC1Q96KC8 554 aaKnown RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 TBATAQ96M53 351 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 PLEKHG4BQ96PX9 1271 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 NAP1L3Q99457 506 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 HOMER3Q9NSC5 361 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 LRIT1Q9P2V4 623 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 NEUROG3Q9Y4Z2 214 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
HERC1-212ENST00000561348 RNF215Q9Y6U7 377 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 U3KQA8 63 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 EME2A4GXA9 379 aaPredicted RBP10□□□□□ -0.81
HERC1-212ENST00000561348 TRABD2BA6NFA1 517 aa10□□□□□ -0.81
HERC1-212ENST00000561348 NUAK1O60285 661 aa10□□□□□ -0.81
HERC1-212ENST00000561348 DNAJC6O75061 913 aa10□□□□□ -0.81
HERC1-212ENST00000561348 CSO75390 466 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 SRP72O76094 671 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 KRT14P02533 472 aa10□□□□□ -0.81
HERC1-212ENST00000561348 RPLP0P05388 317 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 CDK4P11802 303 aa10□□□□□ -0.81
HERC1-212ENST00000561348 ITGALP20701 1170 aa10□□□□□ -0.81
HERC1-212ENST00000561348 RPL10P27635 214 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 CCL7P80098 99 aa10□□□□□ -0.81
HERC1-212ENST00000561348 SHC2P98077 582 aa10□□□□□ -0.81
HERC1-212ENST00000561348 PDE1BQ01064 536 aa10□□□□□ -0.81
HERC1-212ENST00000561348 CDH17Q12864 832 aa10□□□□□ -0.81
HERC1-212ENST00000561348 GPS1Q13098 491 aa10□□□□□ -0.81
HERC1-212ENST00000561348 NFATC2Q13469 925 aa10□□□□□ -0.81
HERC1-212ENST00000561348 SMAD1Q15797 465 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 FNBP1LQ5T0N5 605 aa10□□□□□ -0.81
HERC1-212ENST00000561348 GPRC6AQ5T6X5 926 aa10□□□□□ -0.81
HERC1-212ENST00000561348 DENND5AQ6IQ26 1287 aa10□□□□□ -0.81
HERC1-212ENST00000561348 CCDC137Q6PK04 289 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 TMEM220Q6QAJ8 160 aa10□□□□□ -0.81
HERC1-212ENST00000561348 UNQ6494/PRO21346Q6UXR6 183 aa10□□□□□ -0.81
HERC1-212ENST00000561348 USP53Q70EK8 1073 aa10□□□□□ -0.81
HERC1-212ENST00000561348 LRRTM4Q86VH4 590 aa10□□□□□ -0.81
HERC1-212ENST00000561348 TMPRSS12Q86WS5 348 aa10□□□□□ -0.81
HERC1-212ENST00000561348 TRIM48Q8IWZ4 208 aa10□□□□□ -0.81
HERC1-212ENST00000561348 RAVER1Q8IY67 606 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 MDM1Q8TC05 714 aa10□□□□□ -0.81
HERC1-212ENST00000561348 GFM1Q96RP9 751 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 FOXP3Q9BZS1 431 aa10□□□□□ -0.81
HERC1-212ENST00000561348 PRDM8Q9NQV8 689 aa10□□□□□ -0.81
HERC1-212ENST00000561348 VPS18Q9P253 973 aa10□□□□□ -0.81
HERC1-212ENST00000561348 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
HERC1-212ENST00000561348 APPL1Q9UKG1 709 aa10□□□□□ -0.81
HERC1-212ENST00000561348 ATXN7L1Q9ULK2 861 aaPredicted RBP10□□□□□ -0.81
HERC1-212ENST00000561348 SNX12Q9UMY4 172 aa10□□□□□ -0.81
HERC1-212ENST00000561348 DRG1Q9Y295 367 aaKnown RBP10□□□□□ -0.81
HERC1-212ENST00000561348 ZKSCAN5Q9Y2L8 839 aa10□□□□□ -0.81
HERC1-212ENST00000561348 ST14Q9Y5Y6 855 aa10□□□□□ -0.81
HERC1-212ENST00000561348 PTPRBP23467 1997 aa10□□□□□ -0.81
HERC1-212ENST00000561348 ARHGEF17Q96PE2 2063 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 CTAGE9A4FU28 777 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 OR51F1A6NGY5 319 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 GOLGA8MH3BSY2 632 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 KMOO15229 486 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 VEGFDO43915 354 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 NOBOXO60393 691 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PPFIA2O75334 1257 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 EML2O95834 649 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PRSS56P0CW18 603 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 RALBP11234 206 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 ZNF7P17097 686 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 VCLP18206 1134 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 CA5AP35218 305 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 DEKP35659 375 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 HADHAP40939 763 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 CDKN1CP49918 316 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 DRG2P55039 364 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 OR1D5P58170 312 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 CRADDP78560 199 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 CYP4F3Q08477 520 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PEX6Q13608 980 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PPP1R7Q15435 360 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 MAP9Q49MG5 647 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 LDLRAP1Q5SW96 308 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 KCTD11Q693B1 232 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PDPK2PQ6A1A2 396 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 TTC27Q6P3X3 843 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 CCNI2Q6ZMN8 369 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 CCNJLQ8IV13 435 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 KLHL7Q8IXQ5 586 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 ARL14Q8N4G2 192 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 OTUD6BQ8N6M0 293 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 BEND7Q8N7W2 519 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 PPHLN1Q8NEY8 458 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 GPR156Q8NFN8 814 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 OR6P1Q8NGX9 317 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 ZCCHC14Q8WYQ9 949 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 RTP4Q96DX8 246 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 SGF29Q96ES7 293 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 AHCYL2Q96HN2 611 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 DEPDC7Q96QD5 511 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 SLC38A3Q99624 504 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 NAPGQ99747 312 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms