RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ZNF558Q96NG5 402 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 IWS1Q96ST2 819 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 C16orf70Q9BSU1 422 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 NAPBQ9H115 298 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 ARRDC1-AS1Q9H2J1 176 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 CPVLQ9H3G5 476 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 MAP6D1Q9H9H5 199 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 Q9N2J8 555 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 SPG21Q9NZD8 308 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 NCKIPSDQ9NZQ3 722 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 KLQ9UEF7 1012 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 FBXO4Q9UKT5 387 aa3.99□□□□□ -1.77
CHD8-212ENST00000557329 SRPRBQ9Y5M8 271 aaKnown RBP3.99□□□□□ -1.77
CHD8-212ENST00000557329 ANKRD11Q6UB99 2663 aaPredicted RBP3.99□□□□□ -1.77
CHD8-212ENST00000557329 FRYLO94915 3013 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 NPIPB13A6NJU9 1138 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 A6NNC1 897 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 NPIPB5A8MRT5 1133 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 NPIPB4C9JG80 1138 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 SYN3O14994 580 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 IPO8O15397 1037 aaKnown RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 SPRY3O43610 288 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 HBP1O60381 514 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 TSPAN3O60637 253 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 RPS6KA5O75582 802 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 KCNK5O95279 499 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 RETP07949 1114 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 FCGR2AP12318 317 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 UNGP13051 313 aaPredicted RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 CPA1P15085 419 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 HOXA13P31271 388 aaPredicted RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 CHKAP35790 457 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 GJC1P36383 396 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 LINC00205P59089 165 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 MRPS6P82932 125 aaKnown RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 SRSF5Q13243 272 aaKnown RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 COL28A1Q2UY09 1125 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 ZNF528Q3MIS6 628 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 SBK1Q52WX2 424 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 ARL13AQ5H913 290 aaPredicted RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 DCAF12L2Q5VW00 463 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 HEPHL1Q6MZM0 1159 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 DENND1BQ6P3S1 775 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 PALB2Q86YC2 1186 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 ITPRIPQ8IWB1 547 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 KDM1BQ8NB78 822 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 SLC35F5Q8WV83 523 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 HERPUD2Q9BSE4 406 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 FAM167BQ9BTA0 163 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 DCLK3Q9C098 648 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 HIPK2Q9H2X6 1198 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 PLAC1Q9HBJ0 212 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 PXMP2Q9NR77 195 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 THAP1Q9NVV9 213 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 GRHL1Q9NZI5 618 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 SEL1LQ9UBV2 794 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 TUBE1Q9UJT0 475 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 PNMA2Q9UL42 364 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 FZD10Q9ULW2 581 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 PCDHA7Q9UN72 937 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 TNNQ9UQP3 1299 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 LZTS1Q9Y250 596 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 MRPL11Q9Y3B7 192 aaKnown RBP3.98□□□□□ -1.77
CHD8-212ENST00000557329 RAP2CQ9Y3L5 183 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 TRPV2Q9Y5S1 764 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 GPR179Q6PRD1 2367 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 ZNF292O60281 2723 aa3.98□□□□□ -1.77
CHD8-212ENST00000557329 NRCAMQ92823 1304 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 USP24Q9UPU5 2620 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 RALGAPA1Q6GYQ0 2036 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 CACNA1IQ9P0X4 2223 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 A0A096LPK6 155 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 IGKV6D-41A0A0C4DH26 115 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 OR6C68A6NDL8 312 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 CYSRT1A8MQ03 144 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 TAF4O00268 1085 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 IPO5O00410 1097 aaKnown RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 ASAP2O43150 1006 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 SMAD6O43541 496 aaKnown RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 TCEA3O75764 348 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 LDHAP00338 332 aaKnown RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 PRB1P04280 392 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 HOXB2P14652 356 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 UBA1P22314 1058 aaKnown RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 CCND2P30279 289 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 TNFSF8P32971 234 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 TBL3Q12788 808 aaKnown RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 KCNC3Q14003 757 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 ERV3-1Q14264 604 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 GPR18Q14330 331 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 MLF2Q15773 248 aaPredicted RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 CDC37Q16543 378 aaPredicted RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 GRAMD1BQ3KR37 738 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 SOWAHCQ53LP3 525 aaPredicted RBP3.97□□□□□ -1.77
CHD8-212ENST00000557329 STPG1Q5TH74 334 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 NAA35Q5VZE5 725 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 TPRG1Q6ZUI0 275 aa3.97□□□□□ -1.77
CHD8-212ENST00000557329 SLC24A5Q71RS6 500 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms