RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PNPLA2Q96AD5 504 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 SLC41A2Q96JW4 573 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 FCRL4Q96PJ5 515 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 RMI1Q9H9A7 625 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 ACSS2Q9NR19 701 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 FAM207AQ9NSI2 230 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 PCSK1NQ9UHG2 260 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 PDZD2O15018 2839 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 PCSK5Q92824 1860 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 IGHV5-51A0A0C4DH38 117 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 DAPK3O43293 454 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 GRID2O43424 1007 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 PYGLP06737 847 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SLC2A4P14672 509 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 BRAFP15056 766 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF30P17039 623 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 AMD1P17707 334 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 POLR2FP61218 127 aaKnown RBP12.35□□□□□ -0.43
PSEN1-221ENST00000557293 PPP1CAP62136 330 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF235Q14590 738 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 KCNAB1Q14722 419 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF648Q5T619 568 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-221ENST00000557293 HENMT1Q5T8I9 393 aaKnown RBP12.35□□□□□ -0.43
PSEN1-221ENST00000557293 LCN10Q6JVE6 187 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SLC34A3Q8N130 599 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 MLKLQ8NB16 471 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SLC38A9Q8NBW4 561 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SEC14L1Q92503 715 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 BARD1Q99728 777 aaKnown RBP12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SLC29A3Q9BZD2 475 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 CARD9Q9H257 536 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 NLRC4Q9NPP4 1024 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SAMSN1Q9NSI8 373 aaKnown RBP12.35□□□□□ -0.43
PSEN1-221ENST00000557293 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 SIK3Q9Y2K2 1263 aa12.35□□□□□ -0.43
PSEN1-221ENST00000557293 APCP25054 2843 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 POLEQ07864 2286 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 CROCCQ5TZA2 2017 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 LRCH4O75427 683 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 RASSF9O75901 435 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF8P17098 575 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-221ENST00000557293 AMPD1P23109 780 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
PSEN1-221ENST00000557293 CAMK4Q16566 473 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 ZRANB3Q5FWF4 1079 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 FAM69BQ5VUD6 431 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 FAM92BQ6ZTR7 304 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 RAVER1Q8IY67 606 aaKnown RBP12.34□□□□□ -0.43
PSEN1-221ENST00000557293 CISD2Q8N5K1 135 aaKnown RBP12.34□□□□□ -0.43
PSEN1-221ENST00000557293 TEX26Q8N6G2 289 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 GLIS1Q8NBF1 620 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 C5orf34Q96MH7 638 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 SMAD5Q99717 465 aaKnown RBP12.34□□□□□ -0.43
PSEN1-221ENST00000557293 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
PSEN1-221ENST00000557293 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 SSU72P8A0A1W2PR75 194 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 CHUKO15111 745 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 ZNF185O15231 689 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 VIPP01282 170 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 CAPN1P07384 714 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 MIPP30301 263 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 MMP13P45452 471 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 CAPZBP47756 277 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 SPINT3P49223 89 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 ITGA1P56199 1179 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
PSEN1-221ENST00000557293 GPS2Q13227 327 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 MAMLD1Q13495 774 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-221ENST00000557293 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-221ENST00000557293 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 ABRAXAS1Q6UWZ7 409 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 HPS6Q86YV9 775 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 RHOT1Q8IXI2 618 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 EID2BQ96D98 161 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 UNKQ9C0B0 810 aaKnown RBP12.33□□□□□ -0.44
PSEN1-221ENST00000557293 PDE7BQ9NP56 450 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 TAS2R14Q9NYV8 317 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 RARRES3Q9UL19 164 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 F8P00451 2351 aa12.33□□□□□ -0.44
PSEN1-221ENST00000557293 ANKRD62A6NC57 917 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 ANKUB1A6NFN9 424 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 A6NL46 340 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 PES1O00541 588 aaKnown RBP12.32□□□□□ -0.44
PSEN1-221ENST00000557293 HNRNPH3P31942 346 aaKnown RBP12.32□□□□□ -0.44
PSEN1-221ENST00000557293 TUBB3Q13509 450 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 GPR18Q14330 331 aa12.32□□□□□ -0.44
PSEN1-221ENST00000557293 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms