RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CT47A1Q5JQC4 288 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF648Q5T619 568 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 HENMT1Q5T8I9 393 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 CPZQ66K79 652 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF787Q6DD87 383 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 FAM92BQ6ZTR7 304 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 PPP1R3BQ86XI6 285 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 TRIM48Q8IWZ4 208 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 TEX26Q8N6G2 289 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 AOPEPQ8N6M6 819 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 HSPH1Q92598 858 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 RSC1A1Q92681 617 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 RUFY1Q96T51 708 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 SYT11Q9BT88 431 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 SLC25A23Q9BV35 468 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 TDRD1Q9BXT4 1180 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 POLR1EQ9GZS1 481 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 BRD8Q9H0E9 1235 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 FAM83DQ9H4H8 585 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 UCK1Q9HA47 277 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 KLC4Q9NSK0 619 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 FANCLQ9NW38 375 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 CUEDC1Q9NWM3 386 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 LUZP4Q9P127 313 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF624Q9P2J8 865 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 TTLL3Q9Y4R7 772 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 CSMD1Q96PZ7 3565 aa8.9□□□□□ -0.98
HNRNPC-227ENST00000556897 ZNF106Q9H2Y7 1883 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 ABCA12Q86UK0 2595 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 C1orf232A0A0U1RR37 186 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PDZK1P1A8MUH7 402 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 LGALS16A8MUM7 142 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 C21orf140B9A014 251 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 RECKO95980 971 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PRLP01236 227 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 ATP1A3P13637 1013 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 XRCC1P18887 633 aaPredicted RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 SERPINB6P35237 376 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PCK1P35558 622 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC19A1P41440 591 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 CAPZBP47756 277 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 SPINT3P49223 89 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 RPS18P62269 152 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 UBXN1Q04323 297 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 MRPL49Q13405 166 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 KCNAB1Q14722 419 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 UGT8Q16880 541 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 EIF2S3LQ2VIR3 472 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 CACHD1Q5VU97 1274 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PWWP2BQ6NUJ5 590 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 CRTC3Q6UUV7 619 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 PRSS42Q7Z5A4 293 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 IRF2BP2Q7Z5L9 587 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 RAVER1Q8IY67 606 aaKnown RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 LPCAT1Q8NF37 534 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 THAP4Q8WY91 577 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 KLHL6Q8WZ60 621 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 NUP62CLQ9H1M0 184 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 OR2AG1Q9H205 316 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 CARD9Q9H257 536 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 OCEL1Q9H607 264 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 AKIRIN1Q9H9L7 192 aaPredicted RBP8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 MLXIPLQ9NP71 852 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC23A2Q9UGH3 650 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 DNPEPQ9ULA0 475 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 ADGRG1Q9Y653 693 aa8.89□□□□□ -0.99
HNRNPC-227ENST00000556897 ARGFXA6NJG6 315 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 OR52A4PA6NMU1 304 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 MTA2O94776 668 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 FTLP02792 175 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 MT-ND3P03897 115 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 RARAP10276 462 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 NELFEP18615 380 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 RPL10P27635 214 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PTPN4P29074 926 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 DCTP40126 519 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 CCL11P51671 97 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 CLCNKAP51800 687 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PPP1CAP62136 330 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 TUBB3Q13509 450 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 IL10RAQ13651 578 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR18Q14330 331 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 INPP5JQ15735 1006 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 INSCQ1MX18 579 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 BOLA3Q53S33 107 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 TDRD12Q587J7 1177 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ANKRD20A8PQ5CZ79 823 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PAPD7Q5XG87 772 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ALS2CLQ60I27 953 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 TXNRD3NBQ6F5E7 133 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 ALG1LQ6GMV1 187 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 IRGCQ6NXR0 463 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 PPP1R2P3Q6NXS1 205 aa8.88□□□□□ -0.99
HNRNPC-227ENST00000556897 FAM199XQ6PEV8 388 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms