RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	RALGDS	Q12967	914 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	HIST2H2AC	Q16777	129 aa	Predicted RBP	12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	C11orf91	Q3C1V1	193 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	POM121L1P	Q3SYA9	428 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	AKIRIN2	Q53H80	203 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	MTX3	Q5HYI7	312 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	ZNF697	Q5TEC3	545 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	HIST2H2AA3	Q6FI13	130 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	HIPK1	Q86Z02	1210 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	EID3	Q8N140	333 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	AUTS2	Q8WXX7	1259 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	ZFR	Q96KR1	1074 aa	Known RBP	12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	DEPDC7	Q96QD5	511 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	TSPAN18	Q96SJ8	248 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	TMEM209	Q96SK2	561 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	TTPAL	Q9BTX7	342 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	SLC25A23	Q9BV35	468 aa		12.22	□□□□□ -0.45
TMPO-212	ENST00000556029	PTPRZ1	P23471	2315 aa	Predicted RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	RBM47	A0AV96	593 aa	Known RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	JUN	P05412	331 aa	Known RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	ACR	P10323	421 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	SMAD3	P84022	425 aa	Known RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	MS4A2	Q01362	244 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	PIGG	Q5H8A4	983 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	UGT2A3	Q6UWM9	527 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	CDH24	Q86UP0	819 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	CEP97	Q8IW35	865 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	VPS33A	Q96AX1	596 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	TADA1	Q96BN2	335 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	GALNT8	Q9NY28	637 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	DNAJA2	O60884	412 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	TIPRL	O75663	272 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	KLHL18	O94889	574 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	POLD2	P49005	469 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	SLC7A2	P52569	658 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	CAMK2G	Q13555	558 aa	Predicted RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	FRG1	Q14331	258 aa	Known RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	NR1D2	Q14995	579 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	HERC3	Q15034	1050 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	MON1A	Q86VX9	555 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	ZNF280B	Q86YH2	543 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	RAB42	Q8N4Z0	105 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	ZNF558	Q96NG5	402 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	ADGRE3	Q9BY15	652 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	MRPS26	Q9BYN8	205 aa	Known RBP	12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	RMND5A	Q9H871	391 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	TAS2R13	Q9NYV9	303 aa		12.21	□□□□□ -0.45
TMPO-212	ENST00000556029	HGF	P14210	728 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	ITGAL	P20701	1170 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	PIK3CG	P48736	1102 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	SEPHS1	P49903	392 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	HECTD3	Q5T447	861 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	FUT10	Q6P4F1	479 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	POTEH	Q6S545	545 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	MACC1	Q6ZN28	852 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	RD3	Q7Z3Z2	195 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	TNIP2	Q8NFZ5	429 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	OR7A2P	Q8NGA2	310 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	DPF3	Q92784	378 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	CORO1B	Q9BR76	489 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	BPIFA1	Q9NP55	256 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	TBC1D13	Q9NVG8	400 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	TCAF1	Q9Y4C2	921 aa		12.21	□□□□□ -0.46
TMPO-212	ENST00000556029	EFCAB10	A6NFE3	127 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CCNC	P24863	283 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	NOS3	P29474	1203 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TALDO1	P37837	337 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CXCR3	P49682	368 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TRAF3	Q13114	568 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	FAM45BP	Q6NSW5	357 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	MARVELD2	Q8N4S9	558 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	SMG8	Q8ND04	991 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	UROC1	Q96N76	676 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	PCDHAC1	Q9H158	963 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	ALG2	Q9H553	416 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	MKL2	Q9ULH7	1088 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	BTBD3	Q9Y2F9	522 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TNS1	Q9HBL0	1735 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	KPNA4	O00629	521 aa	Predicted RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	NPHS1	O60500	1241 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	BCAS2	O75934	225 aa	Predicted RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CCR3	P51677	355 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TLE2	Q04725	743 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CNTN1	Q12860	1018 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	USP41	Q3LFD5	358 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	USP39	Q53GS9	565 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	UBXN11	Q5T124	520 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	KIAA0319	Q5VV43	1072 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TRIQK	Q629K1	86 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	AGMO	Q6ZNB7	445 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	LDB1	Q86U70	411 aa	Predicted RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CAMK1D	Q8IU85	385 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	LZTR1	Q8N653	840 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CPSF7	Q8N684	471 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	ENKUR	Q8TC29	256 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	ACBD6	Q9BR61	282 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	ZYG11B	Q9C0D3	744 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	NOL11	Q9H8H0	719 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	EHD3	Q9NZN3	535 aa		12.2	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms