RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 RSC1A1Q92681 617 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 TRIM55Q9BYV6 548 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
XRCC3-212ENST00000555231 ZNF624Q9P2J8 865 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-212ENST00000555231 RCOR3Q9P2K3 495 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-212ENST00000555231 SLC23A2Q9UGH3 650 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 DNAJC16Q9Y2G8 782 aa12.93□□□□□ -0.34
XRCC3-212ENST00000555231 PDZK1P1A8MUH7 402 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 MATN3O15232 486 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 TIAF1O95411 115 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 HLA-DQB2P05538 268 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
XRCC3-212ENST00000555231 GARSP41250 739 aaKnown RBP12.92□□□□□ -0.34
XRCC3-212ENST00000555231 ZNF165P49910 485 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 PMS2P54278 862 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 SLC25A11Q02978 314 aaKnown RBP12.92□□□□□ -0.34
XRCC3-212ENST00000555231 GALNT2Q10471 571 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 QPCTQ16769 361 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 INSCQ1MX18 579 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
XRCC3-212ENST00000555231 ANKRD20A8PQ5CZ79 823 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 FHL5Q5TD97 284 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 CACHD1Q5VU97 1274 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 NCBP2-AS2Q69YL0 99 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 ALG1LQ6GMV1 187 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 FAM92BQ6ZTR7 304 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 TEKT4Q8WW24 435 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 SPATA16Q9BXB7 569 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
XRCC3-212ENST00000555231 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 KCND3Q9UK17 655 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 SHANK1Q9Y566 2161 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
XRCC3-212ENST00000555231 CACNA1DQ01668 2161 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 ESPL1Q14674 2120 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 MTA2O94776 668 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 SLC25A14O95258 325 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CCNYL3P0C7X3 344 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 RNF224P0DH78 156 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 MYBL1P10243 752 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 FGF5P12034 268 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CA4P22748 312 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 RPL10P27635 214 aaKnown RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CASP14P31944 242 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 GJC1P36383 396 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CLCNKAP51800 687 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 RPS18P62269 152 aaKnown RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 GALNT3Q14435 633 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 IL11RAQ14626 422 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 ZNF569Q5MCW4 686 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 TIGD7Q6NT04 549 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 IRGCQ6NXR0 463 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 SASS6Q6UVJ0 657 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 ADGRG6Q86SQ4 1221 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 LRRC49Q8IUZ0 686 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 CPT1CQ8TCG5 803 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 EID2BQ96D98 161 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 AKIRIN1Q9H9L7 192 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-212ENST00000555231 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 TRIM39Q9HCM9 518 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 LHX9Q9NQ69 397 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 LMBRD1Q9NUN5 540 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 ANO10Q9NW15 660 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 TRIM10Q9UDY6 481 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 PADI1Q9ULC6 663 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
XRCC3-212ENST00000555231 NOTCH2Q04721 2471 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 A1L4Q6 167 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 OR52A4PA6NMU1 304 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-212ENST00000555231 MTX2O75431 263 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 SLC4A1P02730 911 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 PIRTP0C851 137 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 ZNF7P17097 686 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-212ENST00000555231 CES1P23141 567 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 CCNCP24863 283 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 PRKCIP41743 596 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 CD86P42081 329 aa12.9□□□□□ -0.34
XRCC3-212ENST00000555231 DRG2P55039 364 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms