RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ATP10BO94823 1461 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 BCLAF3A2AJT9 711 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 IL6P05231 212 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RRASP10301 218 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ADH7P40394 386 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC26A3P40879 764 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CDK18Q07002 472 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RASGEF1BQ0VAM2 473 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 WSCD2Q2TBF2 565 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 XKR6Q5GH73 641 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PRR22Q8IZ63 422 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CYP4Z2PQ8N1L4 340 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MCPH1Q8NEM0 835 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC35G2Q8TBE7 412 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KRCC1Q9NPI7 259 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LRIT1Q9P2V4 623 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NPTNQ9Y639 398 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DISP2A7MBM2 1401 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TLR5O60602 858 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LILRB5O75023 590 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PGGT1BP53609 377 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ERVK-21P61565 698 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TATDN3Q17R31 274 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SMIM14Q96QK8 99 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TSPAN10Q9H1Z9 355 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RASSF1Q9NS23 344 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TBX22Q9Y458 520 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FREM1Q5H8C1 2179 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TRPC5OSA6NMA1 111 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GRIK4Q16099 956 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CHST15Q7LFX5 561 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ANKRD46Q86W74 232 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FAM160A2Q8N612 972 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LZTR1Q8N653 840 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C1QTNF6Q9BXI9 259 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NUSAP1Q9BXS6 441 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RC3H2Q9HBD1 1191 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NANSQ9NR45 359 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KRBA1A5PL33 1030 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RGS12O14924 1447 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PDPK1O15530 556 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KLF8O95600 359 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ADAP00813 363 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MYOGP15173 224 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ACADSBP45954 432 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SLC7A2P52569 658 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PSMD4P55036 377 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GEMP55040 296 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 IKBKEQ14164 716 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SMCO1Q147U7 214 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OTOP3Q7RTS5 596 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TTC29Q8NA56 475 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GDPD5Q8WTR4 605 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MBD2Q9UBB5 411 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 EGFL7Q9UHF1 273 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HAO1Q9UJM8 370 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHGB3Q9Y5G1 929 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 C11orf98E9PRG8 122 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ALOX5P09917 674 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FNTBP49356 437 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PRKCZQ05513 592 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SCGB2A2Q13296 93 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CHADLQ6NUI6 762 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM199Q8N511 208 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 BPIFB6Q8NFQ5 453 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 NEDD1Q8NHV4 660 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GATAD2BQ8WXI9 593 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 SORCS1Q8WY21 1168 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL45Q9BRJ2 306 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 IL20RAQ9UHF4 553 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 STUB1Q9UNE7 303 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 DHRS7Q9Y394 339 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC88AQ3V6T2 1871 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MT-CYBP00156 380 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OPN1MWP04001 364 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 P4HBP07237 508 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OPN1MW2P0DN77 364 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 OPN1MW3P0DN78 364 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA4P43358 317 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CHN2P52757 468 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ADARP55265 1226 aaKnown RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 PMP22Q01453 160 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 HSPB3Q12988 150 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 LTB4RQ15722 352 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 DNAL1Q4LDG9 190 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 RASGEF1AQ8N9B8 481 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TADA1Q96BN2 335 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 GSDMCQ9BYG8 508 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ACTL7BQ9Y614 415 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ITSN2Q9NZM3 1697 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 FLT1P17948 1338 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ABOP16442 354 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 CTC1Q2NKJ3 1217 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TLR10Q9BXR5 811 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TM6SF1Q9BZW5 370 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM185BQ9H7F4 350 aa3.28□□□□□ -1.88
SYNE2-212ENST00000554584 KLRF1Q9NZS2 232 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms