RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 OR2AG1Q9H205 316 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 CARD9Q9H257 536 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 AKIRIN1Q9H9L7 192 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-209ENST00000553308 UCK1Q9HA47 277 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 PCDH18Q9HCL0 1135 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 LHX9Q9NQ69 397 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 DTLQ9NZJ0 730 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 LUZP4Q9P127 313 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF624Q9P2J8 865 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-209ENST00000553308 MYO1AQ9UBC5 1043 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 SLC23A2Q9UGH3 650 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 LIMA1Q9UHB6 759 aaKnown RBP8.95□□□□□ -0.98
SYNE2-209ENST00000553308 DNPEPQ9ULA0 475 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 PADI1Q9ULC6 663 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 TTLL3Q9Y4R7 772 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 SHANK1Q9Y566 2161 aa8.95□□□□□ -0.98
SYNE2-209ENST00000553308 ENO4A6NNW6 628 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PDZK1P1A8MUH7 402 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 C21orf140B9A014 251 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 TOX3O15405 576 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 VIPP01282 170 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 FTLP02792 175 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CCDC172P0C7W6 258 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CCNYL3P0C7X3 344 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PCK1P35558 622 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CLCNKAP51800 687 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PGDP52209 483 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PPP1CAP62136 330 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 NIPAL4Q0D2K0 466 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 MMRN1Q13201 1228 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 MRPL49Q13405 166 aaKnown RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 IL10RAQ13651 578 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 KCNAB1Q14722 419 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 INSCQ1MX18 579 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 TDRD12Q587J7 1177 aaKnown RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CACHD1Q5VU97 1274 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 ALS2CLQ60I27 953 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 IRGCQ6NXR0 463 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PPP1R2P3Q6NXS1 205 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 FAM199XQ6PEV8 388 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PPP1R3BQ86XI6 285 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 RAVER1Q8IY67 606 aaKnown RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 ARRDC2Q8TBH0 407 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 LYSMD1Q96S90 227 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 SLC25A23Q9BV35 468 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 FAM83DQ9H4H8 585 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PCDH9Q9HC56 1237 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CASS4Q9NQ75 786 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 CUEDC1Q9NWM3 386 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-209ENST00000553308 PKD2L2Q9NZM6 624 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 DNAJC16Q9Y2G8 782 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 NOTCH2Q04721 2471 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
SYNE2-209ENST00000553308 NBPF19A0A087WUL8 3843 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MYO9AB2RTY4 2548 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ARGFXA6NJG6 315 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 LRRC53A6NM62 1247 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 OR52A4PA6NMU1 304 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 TCP11X1B4DZS4 312 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 DDX3XO00571 662 aaKnown RBP eCLIP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MTX2O75431 263 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MTA2O94776 668 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 SLC25A14O95258 325 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 CLDN1O95832 211 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 RECKO95980 971 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MT-ND3P03897 115 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 HLA-DQB2P05538 268 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 CD48P09326 243 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 BRAFP15056 766 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 FOLR1P15328 257 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 NELFEP18615 380 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 IL4RP24394 825 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 RPL10P27635 214 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF165P49910 485 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 RPL26P61254 145 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 SLC25A11Q02978 314 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 GALNT2Q10471 571 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 TUBB3Q13509 450 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 LAMB3Q13751 1172 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 GPR18Q14330 331 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 QPCTQ16769 361 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 UGT8Q16880 541 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 EIF2S3LQ2VIR3 472 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 BOLA3Q53S33 107 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ANKRD20A8PQ5CZ79 823 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF569Q5MCW4 686 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 E4F1Q66K89 784 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 PWWP2BQ6NUJ5 590 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 APTXQ7Z2E3 356 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 ADGRG6Q86SQ4 1221 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MAML1Q92585 1016 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 EID2BQ96D98 161 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 SPATA16Q9BXB7 569 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 HAUS4Q9H6D7 363 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms