RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CLCA2Q9UQC9 943 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 CAPN7Q9Y6W3 813 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 PTPRJQ12913 1337 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 A0A0U1RQF3 1178 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 CASTOR2A6NHX0 329 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 EIF3DO15371 548 aaKnown RBP eCLIP3.86□□□□□ -1.79
APAF1-208ENST00000549007 EXOC3O60645 756 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 ALDOAP04075 364 aaKnown RBP3.86□□□□□ -1.79
APAF1-208ENST00000549007 CA3P07451 260 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 DLATP10515 647 aaKnown RBP3.86□□□□□ -1.79
APAF1-208ENST00000549007 PROZP22891 400 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 NR2F2P24468 414 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 DDX6P26196 483 aaKnown RBP eCLIP3.86□□□□□ -1.79
APAF1-208ENST00000549007 GUF1Q8N442 669 aaKnown RBP3.86□□□□□ -1.79
APAF1-208ENST00000549007 P2RX5Q93086 422 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 ATP6V1E2Q96A05 226 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 WWC2-AS2Q96NR7 200 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 ST6GALNAC4Q9H4F1 302 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 SYNCQ9H7C4 482 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 DNAJB4Q9UDY4 337 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 TUBGCP4Q9UGJ1 667 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 EXOC7Q9UPT5 735 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 PRG3Q9Y2Y8 225 aaPredicted RBP3.86□□□□□ -1.79
APAF1-208ENST00000549007 MICAL3Q7RTP6 2002 aa3.86□□□□□ -1.79
APAF1-208ENST00000549007 CHD7Q9P2D1 2997 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CHD9Q3L8U1 2897 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ARL5CA6NH57 179 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 MARCH11A6NNE9 402 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 LACTBL1A8MY62 500 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 H0YCG3 227 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 PTGESO14684 152 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 PPEF2O14830 753 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 OGTO15294 1046 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 FAM189A1O60320 539 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ZC3H11AO75152 810 aaKnown RBP eCLIP3.85□□□□□ -1.79
APAF1-208ENST00000549007 GUCY1B2O75343 617 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 AKAP3O75969 853 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ITGAMP11215 1152 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CYP4B1P13584 511 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CD19P15391 556 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 MCM3P25205 808 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 GPC5P78333 572 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CCDC15Q0P6D6 951 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 LMAN2Q12907 356 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CDC16Q13042 620 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ALKBH1Q13686 389 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 CLCA4Q14CN2 919 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 STX1AQ16623 288 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 BEAN1Q3B7T3 259 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ZCWPW2Q504Y3 356 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SPOUT1Q5T280 376 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 RBM43Q6ZSC3 357 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 Q6ZSN1 163 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 STXBP4Q6ZWJ1 553 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TMEM173Q86WV6 379 aaPredicted RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 BRSK2Q8IWQ3 736 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TDHQ8IZJ6 230 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TMEM116Q8NCL8 245 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 APBB2Q92870 758 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SYAP1Q96A49 352 aaPredicted RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 PABPC5Q96DU9 382 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 FTHL17Q9BXU8 183 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CCDC177Q9NQR7 707 aaPredicted RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 IL1RAPL1Q9NZN1 696 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 UPB1Q9UBR1 384 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SLC30A1Q9Y6M5 507 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SQORQ9Y6N5 450 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 PTPRSQ13332 1948 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TTC3P53804 2025 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 C16orf96A6NNT2 1141 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 I3L4J1 428 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 PSMA7O14818 248 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 ADAM20O43506 726 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 DDHD2O94830 711 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 GJB5O95377 273 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 PIGRP01833 764 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 MCF2P10911 925 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CCNE1P24864 410 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 NDUFS1P28331 727 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TFAMQ00059 246 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 ROR1Q01973 937 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 DNASE1L3Q13609 305 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 BTG3Q14201 252 aaPredicted RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 SNRNP35Q16560 246 aaKnown RBP3.85□□□□□ -1.79
APAF1-208ENST00000549007 ST3GAL2Q16842 350 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 DCAF4L1Q3SXM0 396 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TBRG1Q3YBR2 411 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 JADE1Q6IE81 842 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 GLB1LQ6UWU2 654 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 GALNT13Q8IUC8 556 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 EFCAB13Q8IY85 973 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 SLC44A3Q8N4M1 653 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CSGALNACT2Q8N6G5 542 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 OR5B17Q8NGF7 314 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 RFKQ969G6 155 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 TOP1MTQ969P6 601 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 B3GALT6Q96L58 329 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CASD1Q96PB1 797 aa3.85□□□□□ -1.79
APAF1-208ENST00000549007 CCDC94Q9BW85 323 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms