RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TNFRSF10DQ9UBN6 386 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 STUB1Q9UNE7 303 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PIN4Q9Y237 131 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PTTG1O95997 202 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 UGT2B4P06133 528 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PPIBP23284 216 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FAUP35544 74 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MRPS5P82675 430 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MRPS6P82932 125 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF33AQ06730 810 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 GALNT1Q10472 559 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PSMD5Q16401 504 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PITRM1Q5JRX3 1037 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 COLEC12Q5KU26 742 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RAP1GAP2Q684P5 730 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 NAPEPLDQ6IQ20 393 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CDC73Q6P1J9 531 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MOB2Q70IA6 237 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 METTL23Q86XA0 190 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 HIPK1Q86Z02 1210 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MMAAQ8IVH4 418 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 OFCC1Q8IZS5 231 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ACSF2Q96CM8 615 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ERMAPQ96PL5 475 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 HAPLN3Q96S86 360 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 KCTD15Q96SI1 283 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SDCBP2Q9H190 292 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SERHL2Q9H4I8 314 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SERHLQ9NQF3 203 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FAM86C1Q9NVL1 165 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM216Q9P0N5 145 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MAGEL2Q9UJ55 1249 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PRKAB1Q9Y478 270 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CHURC1-FNTBB4DL54 471 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 H3BMM5 538 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF865P0CJ78 1059 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CDK4P11802 303 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CD40LGP29965 261 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CAPGP40121 348 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SMCO1Q147U7 214 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 EML3Q32P44 896 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF613Q6PF04 617 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 AFTPHQ6ULP2 937 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FAM183BPQ6ZVS7 135 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FGD2Q7Z6J4 655 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF614Q8N883 585 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 NTAN1Q96AB6 310 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 BEX2Q9BXY8 128 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MIR1-1HGQ9H1L0 117 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SMURF2Q9HAU4 748 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SNX7Q9UNH6 387 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CORO2BQ9UQ03 480 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SPO11Q9Y5K1 396 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 WRBO00258 174 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 E2F3O00716 465 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 TIPRLO75663 272 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RECQL4O94761 1208 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 WDPCPO95876 746 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 WEE1P30291 646 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SSTR1P30872 391 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 HNF1BP35680 557 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 MAGEA2P43356 314 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PIK3CGP48736 1102 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ALDH9A1P49189 494 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FCGRTP55899 365 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ERVK-8P63133 956 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 OGDHQ02218 1023 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 BTBD16Q32M84 506 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 UAP1L1Q3KQV9 507 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RALGPS1Q5JS13 557 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 AARS2Q5JTZ9 985 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CLVS2Q5SYC1 327 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 GRTP1Q5TC63 336 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 OR52E8Q6IFG1 317 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 LIN54Q6MZP7 749 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PMF1Q6P1K2 205 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CYP20A1Q6UW02 462 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PGAP1Q75T13 922 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 CHMP1BQ7LBR1 199 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PIWIL4Q7Z3Z4 852 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RASAL3Q86YV0 1011 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ADGRF2Q8IZF7 708 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 PGAM4Q8N0Y7 254 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 Q8N9G6 341 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZFP28Q8NHY6 868 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 RFT1Q96AA3 541 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ROPN1LQ96C74 230 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF486Q96H40 463 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 HHIPL1Q96JK4 782 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF408Q9H9D4 720 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 KLHL1Q9NR64 748 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 OLA1Q9NTK5 396 aaKnown RBP6.02□□□□□ -1.45
PTPRD-214ENST00000540109 SETD4Q9NVD3 440 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 FNIP2Q9P278 1114 aa6.02□□□□□ -1.45
PTPRD-214ENST00000540109 KBTBD13C9JR72 458 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 KCNN4O15554 427 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 DENRO43583 198 aaKnown RBP6.01□□□□□ -1.45
PTPRD-214ENST00000540109 NRP2O60462 931 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 CREB1P16220 341 aa6.01□□□□□ -1.45
PTPRD-214ENST00000540109 GNAZP19086 355 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms