RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR2T3Q8NH03 318 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 LPPQ93052 612 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 SLCO4A1Q96BD0 722 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TMIGD2Q96BF3 282 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 RMDN1Q96DB5 314 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 CENPNQ96H22 339 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 MAGED4Q96JG8 741 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 FAM84AQ96KN4 292 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 HEXIM2Q96MH2 286 aaKnown RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF641Q96N77 438 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 CSPG4P5Q96PW8 444 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 VAT1Q99536 393 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 NEURL2Q9BR09 285 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TCHPQ9BT92 498 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TRMOQ9BU70 441 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 NPLQ9BXD5 320 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ACE2Q9BYF1 805 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 PAIP1Q9H074 479 aaKnown RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 RPF2Q9H7B2 306 aaKnown RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 RPF1Q9H9Y2 349 aaKnown RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TRPC7Q9HCX4 862 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 SPAG4Q9NPE6 437 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 SLC38A7Q9NVC3 462 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ATAD3AQ9NVI7 634 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 RIC8BQ9NVN3 520 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 DTLQ9NZJ0 730 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 SIX4Q9UIU6 781 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 CROTQ9UKG9 612 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 FBXO4Q9UKT5 387 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 TRHDEQ9UKU6 1024 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 PCDHGB4Q9UN71 923 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ERGIC3Q9Y282 383 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 SIT1Q9Y3P8 196 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF711Q9Y462 761 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 PCDHGB5Q9Y5G0 923 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 COPG1Q9Y678 874 aaKnown RBP7.63□□□□□ -1.19
CCDC60-204ENST00000539847 CACNA1IQ9P0X4 2223 aa7.63□□□□□ -1.19
CCDC60-204ENST00000539847 ZCWPW2A0A1B0GU75 182 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TYW5A2RUC4 315 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 GOLGA8TH3BQL2 631 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 FBP2O00757 339 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NRP1O14786 923 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TEX28O15482 410 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CFLARO15519 480 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 B4GALT3O60512 393 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NOL3O60936 208 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ZMPSTE24O75844 475 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 RASAL1O95294 804 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PIGNO95427 931 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CPNE6O95741 557 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 AP2A1O95782 977 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NTRK1P04629 796 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 PRKCBP05771 671 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 GPIP06744 558 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HNRNPA1P09651 372 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SP9P0CG40 484 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 LAMP2P13473 410 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ACPPP15309 386 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NFKB1P19838 968 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CDH3P22223 829 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 S100A1P23297 94 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MGAT1P26572 445 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HOXA9P31269 272 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HOXA11P31270 313 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HOXD12P35452 270 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ARL4AP40617 200 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 DPP6P42658 865 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 STT3AP46977 705 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HLCSP50747 726 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 STARD6P59095 220 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 RPS3AP61247 264 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NAA20P61599 178 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 RBP5P82980 135 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ZNF33AQ06730 810 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MERTKQ12866 999 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 GRIK2Q13002 908 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MTM1Q13496 603 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 HTR4Q13639 388 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 NDUFA5Q16718 116 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CCNYL2Q5T2Q4 361 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ITPRIPL1Q6GPH6 555 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TRNP1Q6NT89 227 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CASC4Q6P4E1 433 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 ABRAXAS1Q6UWZ7 409 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 USP51Q70EK9 711 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TRMT1LQ7Z2T5 733 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 KIAA0907Q7Z7F0 614 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 UNC93AQ86WB7 457 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 DHFR2Q86XF0 187 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CNTN4Q8IWV2 1026 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 LSMEM2Q8N112 164 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CENPSQ8N2Z9 138 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 MINDY1Q8N5J2 469 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 CELF2-AS1Q8N7Q2 184 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 TRPV3Q8NET8 790 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SLC35F5Q8WV83 523 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 LRTOMTQ8WZ04 291 aa7.62□□□□□ -1.19
CCDC60-204ENST00000539847 SMG7Q92540 1137 aaKnown RBP7.62□□□□□ -1.19
CCDC60-204ENST00000539847 POP5Q969H6 163 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms