RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MC4RP32245 332 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 CA5AP35218 305 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 SLC1A2P43004 574 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 PTPN5P54829 565 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 CSE1LP55060 971 aaKnown RBP17.08■□□□□ 0.32
CLN6-202ENST00000538696 CHRNA6Q15825 494 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 LPAL2Q16609 132 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 WDR45BQ5MNZ6 344 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.32
CLN6-202ENST00000538696 ZNF470Q6ECI4 717 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 NEPROQ6NW34 567 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 PNCKQ6P2M8 343 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 ANKRD42Q8N9B4 389 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 C1orf216Q8TAB5 229 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 MTBPQ96DY7 904 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 SMC6Q96SB8 1091 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 MCMBPQ9BTE3 642 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 SPATA16Q9BXB7 569 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 MIR1-1HGQ9H1L0 117 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 NSMCE4AQ9NXX6 385 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 POM121BA6NF01 834 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 FPGTO14772 594 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 RFPL1O75677 317 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 SRP72O76094 671 aaKnown RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 GOT2P00505 430 aaKnown RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 PRSS56P0CW18 603 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 PYGBP11216 843 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 KRT4P19013 534 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 TEAD1P28347 426 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 GABRB3P28472 473 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 FOXN2P32314 431 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 MDH1P40925 334 aaKnown RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 CCNFP41002 786 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 GPR1P46091 355 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 LIMK2P53671 638 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 PRAMEP78395 509 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 GUCY1A3Q02108 690 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 CTBP1Q13363 440 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 AFTPHQ6ULP2 937 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 KYAT3Q6YP21 454 aaKnown RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 TIFABQ6ZNK6 161 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 SH2D5Q6ZV89 423 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 PTAR1Q7Z6K3 402 aaPredicted RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 RGL4Q8IZJ4 473 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 OTUD6BQ8N6M0 293 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 C2CD4AQ8NCU7 369 aaPredicted RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 OR6P1Q8NGX9 317 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 MGARPQ8TDB4 240 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 DTX3LQ8TDB6 740 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 ATXN7L3BQ96GX2 97 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 BMFQ96LC9 184 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 ZSCAN5AQ9BUG6 496 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 MARCH4Q9P2E8 410 aaPredicted RBP17.07■□□□□ 0.32
CLN6-202ENST00000538696 APPL1Q9UKG1 709 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 TMPRSS11EQ9UL52 423 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 PI4KAP42356 2102 aa17.07■□□□□ 0.32
CLN6-202ENST00000538696 A0A1W2PR77 199 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.324e-7■■■■■ 28.6
CLN6-202ENST00000538696 SPRP35270 261 aaPredicted RBP17.06■□□□□ 0.32
CLN6-202ENST00000538696 PFN3P60673 137 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 GNGT1P63211 74 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 SLC18A2Q05940 514 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 INPP5AQ14642 412 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 ATP13A5Q4VNC0 1218 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 ADAMTSL4Q6UY14 1074 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 ABI3BPQ7Z7G0 1075 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 DCLK2Q8N568 766 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 PNPLA1Q8N8W4 532 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 BANPQ8N9N5 519 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 CAPS2Q9BXY5 557 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 RHOJQ9H4E5 214 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 FAM96AQ9H5X1 160 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 TM9SF3Q9HD45 589 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 SSU72Q9NP77 194 aaKnown RBP17.06■□□□□ 0.32
CLN6-202ENST00000538696 AASDHPPTQ9NRN7 309 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 CNOT6Q9ULM6 557 aaKnown RBP17.06■□□□□ 0.32
CLN6-202ENST00000538696 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
CLN6-202ENST00000538696 HS3ST3A1Q9Y663 406 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 TMEM131Q92545 1883 aa17.06■□□□□ 0.32
CLN6-202ENST00000538696 A6NNZ2 444 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 TPP1O14773 563 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 INPP4BO15327 924 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 TYROBPO43914 113 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 WNT1P04628 370 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 PYGLP06737 847 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 UGT1A6P19224 532 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ITGALP20701 1170 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 UGT1A1P22309 533 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 UGT1A4P22310 534 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 UGT1A3P35503 534 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 UGT1A5P35504 534 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 TRIM23P36406 574 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 CDKN1CP49918 316 aaPredicted RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 RACK1P63244 317 aaKnown RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 NFATC2Q13469 925 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
CLN6-202ENST00000538696 PEAR1Q5VY43 1037 aaPredicted RBP17.05■□□□□ 0.32
CLN6-202ENST00000538696 PSAPL1Q6NUJ1 521 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms