RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NUP85Q9BW27 656 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TWSG1Q9GZX9 223 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ISCUQ9H1K1 167 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 OR2AG1Q9H205 316 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 UCK1Q9HA47 277 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RAD18Q9NS91 495 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SIDT1Q9NXL6 827 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 VPS4AQ9UN37 437 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PCYT1BQ9Y5K3 369 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KCNMB2Q9Y691 235 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 A6NCN8 305 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MTSS1O43312 755 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 C9P02748 559 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 HLA-DQB2P05538 268 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NR1D1P20393 614 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CD86P42081 329 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 UBE2IP63279 158 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GTF2H3Q13889 308 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 IL11RAQ14626 422 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PAFAH1B3Q15102 231 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NCBP2-AS2Q69YL0 99 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 IRGCQ6NXR0 463 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LRRTM4Q86VH4 590 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PPP1R3BQ86XI6 285 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SEC14L1Q92503 715 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MIB2Q96AX9 1013 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZDHHC12Q96GR4 267 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 BTBD6Q96KE9 485 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PLEKHG4BQ96PX9 1271 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 THAP2Q9H0W7 228 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF768Q9H5H4 540 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 POT1Q9NUX5 634 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ATXN10Q9UBB4 475 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DNAJC16Q9Y2G8 782 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 BZW2Q9Y6E2 419 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 FLNCQ14315 2725 aa12.79□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PIPSLA2A3N6 862 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 BLACEA4D250 179 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ANKRD66B4E2M5 251 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KMOO15229 486 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CD48P09326 243 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF28P17035 718 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF8P17098 575 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 XRCC1P18887 633 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 HALP42357 657 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CAPZBP47756 277 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ARL4DP49703 201 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CLCNKAP51800 687 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MLLT10P55197 1068 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TYRO3Q06418 890 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DPYSL3Q14195 570 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GALNT3Q14435 633 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PDK2Q15119 407 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 QPCTQ16769 361 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CACHD1Q5VU97 1274 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PDPK2PQ6A1A2 396 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCDC70Q6NSX1 233 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RBM12BQ8IXT5 1001 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 FATE1Q969F0 183 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GPR63Q9BZJ6 419 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TRIM39Q9HCM9 518 aa12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CNOT6Q9ULM6 557 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TTLL8A6PVC2 850 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 AGFG2O95081 481 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SERPINC1P01008 464 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PRLP01236 227 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KRT7P08729 469 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ZNF7P17097 686 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 IDSP22304 550 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 F8A1P23610 371 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PMS2P54278 862 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 SH3BP2P78314 561 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 NIPAL4Q0D2K0 466 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 DNASE1L3Q13609 305 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 FAM92BQ6ZTR7 304 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 PRSS42Q7Z5A4 293 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TRAPPC5Q8IUR0 188 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TRAM1L1Q8N609 369 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 ARRDC2Q8TBH0 407 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 GLYATL1Q969I3 302 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TTC25Q96NG3 672 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 TSGA13Q96PP4 275 aa12.77□□□□□ -0.37
TNFRSF1A-207ENST00000535958 WDR24Q96S15 920 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms