RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TRPV1Q8NER1 839 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 OR4N2Q8NGD1 307 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 KAT2AQ92830 837 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 FBXL8Q96CD0 374 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 EVI5LQ96CN4 794 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 ELP4Q96EB1 424 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 KLHL15Q96M94 604 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 BBS4Q96RK4 519 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TGS1Q96RS0 853 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RAD9AQ99638 391 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PHF7Q9BWX1 381 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 MOV10L1Q9BXT6 1211 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 AGXT2Q9BYV1 514 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PUS3Q9BZE2 481 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 FTOQ9C0B1 505 aaKnown RBP eCLIP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PRDM13Q9H4Q3 707 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SLC32A1Q9H598 525 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 AAMDCQ9H7C9 122 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TBC1D22BQ9NU19 505 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RAI14Q9P0K7 980 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 LIMA1Q9UHB6 759 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PCDHA12Q9UN75 941 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CAMK2AQ9UQM7 478 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RIF1Q5UIP0 2472 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 IL16Q14005 1332 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 WDR87Q6ZQQ6 2873 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SIP14410 1827 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 A0A0G2JMZ2 1700 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ASB14A6NK59 587 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 OR6C75A6NL08 312 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 B4DLN1 442 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 DAB1O75553 588 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SLC25A12O75746 678 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 TFP02787 698 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 HEXAP06865 529 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 UQCRFS1P1P0C7P4 283 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 CHRNB2P17787 502 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ALOX12P18054 663 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 KCNA5P22460 613 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 EPHA8P29322 1005 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 CDAP32320 146 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 RXRGP48443 463 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 TUBP50607 506 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 MRPL12P52815 198 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 CCL23P55773 120 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 MECOMQ03112 1051 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 PRKG2Q13237 762 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ACVR2BQ13705 512 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ME3Q16798 604 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 Q4G0T1 1027 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 WASHC2DQ5SRD0 308 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 C6orf141Q5SZD1 244 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 DCAF12L2Q5VW00 463 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 NAA16Q6N069 864 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 CES5AQ6NT32 575 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 TATDN1Q6P1N9 297 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 FAM122CQ6P4D5 195 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SLC2A7Q6PXP3 512 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 COLCA1Q6ZS62 124 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 G2E3Q7L622 706 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 DGLUCYQ7Z3D6 616 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 PCGF5Q86SE9 256 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 KIAA2013Q8IYS2 634 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 KDM1BQ8NB78 822 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 RASSF8Q8NHQ8 419 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 METTL6Q8TCB7 284 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 NSMCE1Q8WV22 266 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 DDB2Q92466 427 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 TMEM18Q96B42 140 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 PABPC5Q96DU9 382 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SLITRK1Q96PX8 696 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SH3GL2Q99962 352 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 LMAN2LQ9H0V9 348 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 RBM38Q9H0Z9 239 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 CCDC68Q9H2F9 335 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 FOXP1Q9H334 677 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SMARCAD1Q9H4L7 1026 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 KLHL31Q9H511 634 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 RPAP3Q9H6T3 665 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 MLXIPLQ9NP71 852 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 DDX4Q9NQI0 724 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SNTG1Q9NSN8 517 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 C20orf141Q9NUB4 165 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 HCFC1R1Q9NWW0 138 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 NSMCE4AQ9NXX6 385 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 MSRB1Q9NZV6 116 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 HEY2Q9UBP5 337 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 UBA2Q9UBT2 640 aaPredicted RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 WNT16Q9UBV4 365 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 NDRG3Q9UGV2 375 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 SWAP70Q9UH65 585 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 FZD10Q9ULW2 581 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ERVK-11Q9UQG0 969 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 MCM3APO60318 1980 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ATXN2Q99700 1313 aaKnown RBP3.37□□□□□ -1.87
SNHG1-202ENST00000535689 KDM3AQ9Y4C1 1321 aa3.37□□□□□ -1.87
SNHG1-202ENST00000535689 ROBO3Q96MS0 1386 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms