RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 LMO7DNF2Z398 122 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 FUCA1P04066 466 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 CELA2BP08218 269 aaPredicted RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 ZNF8P17098 575 aaPredicted RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 CSRP1P21291 193 aaKnown RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 AKT1P31749 480 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 CA5AP35218 305 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 GTF2H3Q13889 308 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 PYCR3Q53H96 274 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 DNAJC21Q5F1R6 531 aaKnown RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 HIBCHQ6NVY1 386 aaPredicted RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 NXPE1Q8N323 547 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 MPP5Q8N3R9 675 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 DEFB124Q8NES8 71 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 RHBDD1Q8TEB9 315 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 HDAC10Q969S8 669 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 CLPBQ9H078 707 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 DPH5Q9H2P9 285 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 TREX1Q9NSU2 369 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 PCOLCE2Q9UKZ9 415 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 DOLKQ9UPQ8 538 aa23.92■■□□□ 1.42
SIPA1-210ENST00000534406 GOLGA4Q13439 2230 aaKnown RBP23.92■■□□□ 1.42
SIPA1-210ENST00000534406 NUAK1O60285 661 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 DNAJC6O75061 913 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 ANXA6P08133 673 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 ILF3Q12906 894 aaKnown RBP eCLIP23.91■■□□□ 1.42
SIPA1-210ENST00000534406 CALCOCO2Q13137 446 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 GKN2Q86XP6 184 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 SDR16C5Q8N3Y7 309 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 EID2Q8N6I1 236 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 OR4C6Q8NH72 309 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.91■■□□□ 1.42
SIPA1-210ENST00000534406 TTC25Q96NG3 672 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 CAMK1GQ96NX5 476 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 DUSP23Q9BVJ7 150 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 FAM96AQ9H5X1 160 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 ZNHIT2Q9UHR6 403 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 ANAPC5Q9UJX4 755 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 GPSM3Q9Y4H4 160 aa23.91■■□□□ 1.42
SIPA1-210ENST00000534406 ZFC3H1O60293 1989 aaKnown RBP23.91■■□□□ 1.42
SIPA1-210ENST00000534406 TRBV5-4A0A0C4DH59 114 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 OR51F1A6NGY5 319 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 TPP1O14773 563 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 GRID2O43424 1007 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 CBFA2T3O75081 653 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 CDK14O94921 469 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 GOT2P00505 430 aaKnown RBP23.9■■□□□ 1.42
SIPA1-210ENST00000534406 MSH3P20585 1137 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 NMBRP28336 390 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 FOXN2P32314 431 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 PUM1Q14671 1186 aaKnown RBP eCLIP23.9■■□□□ 1.42
SIPA1-210ENST00000534406 DEFB133Q30KQ1 61 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 DUPD1Q68J44 220 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 CRTC3Q6UUV7 619 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 MICALCLQ6ZW33 695 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 TAS2R42Q7RTR8 314 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 TAF8Q7Z7C8 310 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 CEP112Q8N8E3 955 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 OR6P1Q8NGX9 317 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 CDC6Q99741 560 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 GSDMCQ9BYG8 508 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 WHRNQ9P202 907 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 FTSJ1Q9UET6 329 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 MAD1L1Q9Y6D9 718 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 PCNX2A6NKB5 2137 aa23.9■■□□□ 1.42
SIPA1-210ENST00000534406 FAM237BA0A1B0GVD1 139 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 CHUKO15111 745 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 ZNF500O60304 480 aaPredicted RBP23.89■■□□□ 1.41
SIPA1-210ENST00000534406 ACRV1P26436 265 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 TMEM115Q12893 351 aaPredicted RBP23.89■■□□□ 1.41
SIPA1-210ENST00000534406 LRP8Q14114 963 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 PSAPL1Q6NUJ1 521 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 TRAPPC5Q8IUR0 188 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 PDIK1LQ8N165 341 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 MMGT1Q8N4V1 131 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 BAHD1Q8TBE0 780 aaPredicted RBP23.89■■□□□ 1.41
SIPA1-210ENST00000534406 GPBAR1Q8TDU6 330 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 SCG3Q8WXD2 468 aaKnown RBP23.89■■□□□ 1.41
SIPA1-210ENST00000534406 MFSD3Q96ES6 412 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 STAMBPL1Q96FJ0 436 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 DCUN1D1Q96GG9 259 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 COPS8Q99627 209 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 PRKAB1Q9Y478 270 aa23.89■■□□□ 1.41
SIPA1-210ENST00000534406 PCYT1BQ9Y5K3 369 aaPredicted RBP23.89■■□□□ 1.41
SIPA1-210ENST00000534406 MAGEB16A2A368 324 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 CFAP99D6REC4 459 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 TRIM38O00635 465 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 PRSS56P0CW18 603 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 GIMD1P0DJR0 217 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 RALBP11234 206 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 PAMP19021 973 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 CDKN1CP49918 316 aaPredicted RBP23.88■■□□□ 1.41
SIPA1-210ENST00000534406 NOVA1P51513 510 aaKnown RBP23.88■■□□□ 1.41
SIPA1-210ENST00000534406 ARL4CP56559 192 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 CTBSQ01459 385 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 HIF1AQ16665 826 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 KIAA0930Q6ICG6 404 aaPredicted RBP23.88■■□□□ 1.41
SIPA1-210ENST00000534406 LVRNQ6Q4G3 990 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 CES3Q6UWW8 571 aa23.88■■□□□ 1.41
SIPA1-210ENST00000534406 LRRTM4Q86VH4 590 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms