RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TIAF1O95411 115 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 PRLP01236 227 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 SLC4A1P02730 911 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 C9P02748 559 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 ANKRD34CP0C6C1 535 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 ARL4DP49703 201 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 RPS15P62841 145 aaKnown RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 KCNAB1Q14722 419 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 INPP5JQ15735 1006 aaPredicted RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 PPP1R3BQ86XI6 285 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 TEX26Q8N6G2 289 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 MLPHQ9BV36 600 aaPredicted RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 CARD9Q9H257 536 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 PCDH18Q9HCL0 1135 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 TRIM39Q9HCM9 518 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 PDE7BQ9NP56 450 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 ACSS2Q9NR19 701 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
COPB1-209ENST00000533096 MAP4K5Q9Y4K4 846 aa12.84□□□□□ -0.35
COPB1-209ENST00000533096 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 OR52A4PA6NMU1 304 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 MTX2O75431 263 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 MT-ND3P03897 115 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 FGF5P12034 268 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 SKILP12757 684 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 FOLR1P15328 257 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 IL4RP24394 825 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 SERPINB6P35237 376 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 ZNF165P49910 485 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 NIPAL4Q0D2K0 466 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 ASIC2Q16515 512 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 DPYSL2Q16555 572 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 PRR30Q53SZ7 412 aaPredicted RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 CPZQ66K79 652 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 PWWP2BQ6NUJ5 590 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 AVL9Q8NBF6 648 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 RSC1A1Q92681 617 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 CXorf40BQ96DE9 158 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 ZDHHC12Q96GR4 267 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 ING2Q9H160 280 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 SHOC2Q9UQ13 582 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 FLNCQ14315 2725 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 ANKRD36A6QL64 1941 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 LRP4O75096 1905 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 MN1Q10571 1320 aaPredicted RBP12.83□□□□□ -0.36
COPB1-209ENST00000533096 LRRK1Q38SD2 2015 aa12.83□□□□□ -0.36
COPB1-209ENST00000533096 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 MATN3O15232 486 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 MTA2O94776 668 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 PIRTP0C851 137 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 ZNF7P17097 686 aaPredicted RBP12.82□□□□□ -0.36
COPB1-209ENST00000533096 CA4P22748 312 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 CES1P23141 567 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 PCK1P35558 622 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 PDE1BQ01064 536 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 QPCTQ16769 361 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
COPB1-209ENST00000533096 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
COPB1-209ENST00000533096 ADGRG6Q86SQ4 1221 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 ARRDC2Q8TBH0 407 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 KLHL6Q8WZ60 621 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 MR1Q95460 341 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 TDRD1Q9BXT4 1180 aaKnown RBP12.82□□□□□ -0.36
COPB1-209ENST00000533096 DNPEPQ9ULA0 475 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
COPB1-209ENST00000533096 PCDHGA6Q9Y5G7 932 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 SCINQ9Y6U3 715 aa12.82□□□□□ -0.36
COPB1-209ENST00000533096 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.362e-29■■□□□ 12
COPB1-209ENST00000533096 ZNF185O15231 689 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 TOX3O15405 576 aaPredicted RBP12.81□□□□□ -0.36
COPB1-209ENST00000533096 DDX3YO15523 660 aaKnown RBP12.81□□□□□ -0.36
COPB1-209ENST00000533096 KRT86O43790 486 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 CDK14O94921 469 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 JCHAINP01591 159 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 CD48P09326 243 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 ATP1A3P13637 1013 aa12.81□□□□□ -0.36
COPB1-209ENST00000533096 NELFEP18615 380 aaKnown RBP12.81□□□□□ -0.36
COPB1-209ENST00000533096 IDSP22304 550 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms