RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ACSS2Q9NR19 701 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 RAD18Q9NS91 495 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 POT1Q9NUX5 634 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 MAP10Q9P2G4 905 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 CHKBQ9Y259 395 aa11.4□□□□□ -0.58
CMTM1-216ENST00000533078 ESPL1Q14674 2120 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 A0A0U1RQS6 177 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 SPAG6O75602 509 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 SLC25A14O95258 325 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 DDAH2O95865 285 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 FGF5P12034 268 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 GZMAP12544 262 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 CAPZBP47756 277 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 UQCRFS1P47985 274 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 CLCNKAP51800 687 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 SH3BP2P78314 561 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 MYL5Q02045 173 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 SEMA5AQ13591 1074 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 PIGHQ14442 188 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 HENMT1Q5T8I9 393 aaKnown RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 IRGCQ6NXR0 463 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 KLHL35Q6PF15 583 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 PRSS42Q7Z5A4 293 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 TEX26Q8N6G2 289 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 AOPEPQ8N6M6 819 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 TEKT4Q8WW24 435 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 CXorf40BQ96DE9 158 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 PLEKHG4BQ96PX9 1271 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 ZSCAN5AQ9BUG6 496 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 MLPHQ9BV36 600 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 TDRD1Q9BXT4 1180 aaKnown RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 GPR87Q9BY21 358 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 OR2AG1Q9H205 316 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 ACTL8Q9H568 366 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 LHX9Q9NQ69 397 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 RBM22Q9NW64 420 aaKnown RBP eCLIP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 RCOR3Q9P2K3 495 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 LIMA1Q9UHB6 759 aaKnown RBP11.39□□□□□ -0.59
CMTM1-216ENST00000533078 RARRES3Q9UL19 164 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 CENPEQ02224 2701 aa11.39□□□□□ -0.59
CMTM1-216ENST00000533078 K7EM74 188 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 KMOO15229 486 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 FURINP09958 794 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 RARAP10276 462 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 HALP42357 657 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 SSR1P43307 286 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 DSC2Q02487 901 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 ACY1Q03154 408 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 TUBB3Q13509 450 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 SEPT7Q16181 437 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 IFI16Q16666 785 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 PDPK2PQ6A1A2 396 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 CRTC3Q6UUV7 619 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 SASS6Q6UVJ0 657 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 FAM92BQ6ZTR7 304 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 IRF2BP2Q7Z5L9 587 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 LRRTM4Q86VH4 590 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 SIDT2Q8NBJ9 832 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 CT55Q8WUE5 264 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 UBXN4Q92575 508 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 RNF31Q96EP0 1072 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 FCRL4Q96PJ5 515 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 LYSMD1Q96S90 227 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 TRIM7Q9C029 511 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 BRD8Q9H0E9 1235 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 TRIM39Q9HCM9 518 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 SLAMF7Q9NQ25 335 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 ATXN10Q9UBB4 475 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 CNOT6Q9ULM6 557 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 ZNF451Q9Y4E5 1061 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 PCDHGB7Q9Y5F8 929 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 PCDHGA9Q9Y5G4 932 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 CRYBG3Q68DQ2 2970 aa11.38□□□□□ -0.59
CMTM1-216ENST00000533078 ZNF106Q9H2Y7 1883 aaKnown RBP11.38□□□□□ -0.59
CMTM1-216ENST00000533078 A1L4Q6 167 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 FADS2P1A8MWK0 482 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 ANKRD66B4E2M5 251 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 MATN3O15232 486 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 DPM1O60762 260 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 DNAJB5O75953 348 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 ZNF8P17098 575 aaPredicted RBP11.37□□□□□ -0.59
CMTM1-216ENST00000533078 NELFEP18615 380 aaKnown RBP11.37□□□□□ -0.59
CMTM1-216ENST00000533078 MX2P20592 715 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 IDSP22304 550 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 IL1R2P27930 398 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 PTPN4P29074 926 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 LEPRP48357 1165 aaKnown RBP11.37□□□□□ -0.59
CMTM1-216ENST00000533078 GTF2H3Q13889 308 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 CHRNA6Q15825 494 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 HADHQ16836 314 aaKnown RBP11.37□□□□□ -0.59
CMTM1-216ENST00000533078 UGT8Q16880 541 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 PLA2G4EQ3MJ16 856 aa11.37□□□□□ -0.59
CMTM1-216ENST00000533078 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms