RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ABCA12Q86UK0 2595 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 GOLGA6L3A6NEY3 463 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 ARGFXA6NJG6 315 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 KIF1CO43896 1103 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 NUAK1O60285 661 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 DPM1O60762 260 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 SORBS2O94875 1100 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CLDN7O95471 211 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CLDN1O95832 211 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CCDC172P0C7W6 258 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 HOXB1P14653 301 aaPredicted RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 VARSP26640 1264 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 PTPN4P29074 926 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC19A1P41440 591 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CLCNKAP51800 687 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 UBE2HP62256 183 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 RPS18P62269 152 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 PDE1BQ01064 536 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CHAF1BQ13112 559 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 KRT31Q15323 416 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CHRNA6Q15825 494 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 UGT8Q16880 541 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CPZQ66K79 652 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 IRGCQ6NXR0 463 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 PPP1R2P3Q6NXS1 205 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 JMJD6Q6NYC1 403 aaPredicted RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 FAM199XQ6PEV8 388 aaPredicted RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 FAM92BQ6ZTR7 304 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 RAVER1Q8IY67 606 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 AOPEPQ8N6M6 819 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CCHCR1Q8TD31 782 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 KLHL6Q8WZ60 621 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 POLR1EQ9GZS1 481 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 BRD8Q9H0E9 1235 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 ING2Q9H160 280 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 OR2AG1Q9H205 316 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 FAM83DQ9H4H8 585 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 ETNK2Q9NVF9 386 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 PKD2L2Q9NZM6 624 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 SCHIP1Q9P0W5 487 aaPredicted RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 ATXN10Q9UBB4 475 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 RARRES3Q9UL19 164 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 G3BP2Q9UN86 482 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CHKBQ9Y259 395 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 FARSAQ9Y285 508 aaKnown RBP7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 SIK3Q9Y2K2 1263 aa7.82□□□□□ -1.16
NSMCE2-213ENST00000523824 CRYBG3Q68DQ2 2970 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 C1orf232A0A0U1RR37 186 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TMEM191CA6NGB0 347 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PDZK1P1A8MUH7 402 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 FADS2P1A8MWK0 482 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 MTA2O94776 668 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC25A14O95258 325 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF8P17098 575 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 NELFEP18615 380 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 CA4P22748 312 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 CES1P23141 567 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SERPINB6P35237 376 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SPINT3P49223 89 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ARL4DP49703 201 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TUBB3Q13509 450 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SEPT7Q16181 437 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 INSCQ1MX18 579 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PRR30Q53SZ7 412 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TDRD12Q587J7 1177 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ANKRD20A8PQ5CZ79 823 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 CT47A1Q5JQC4 288 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF648Q5T619 568 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 HENMT1Q5T8I9 393 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PAPD7Q5XG87 772 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PLEKHA7Q6IQ23 1121 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PWWP2BQ6NUJ5 590 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PRSS42Q7Z5A4 293 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 POLNQ7Z5Q5 900 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SYVN1Q86TM6 617 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 BPHLQ86WA6 291 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SRRM1Q8IYB3 904 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TEX26Q8N6G2 289 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SIDT2Q8NBJ9 832 aaKnown RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 LPCAT1Q8NF37 534 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 HSPH1Q92598 858 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 RSC1A1Q92681 617 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 FCRL4Q96PJ5 515 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 WDR24Q96S15 920 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 RUFY1Q96T51 708 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 AKIRIN1Q9H9L7 192 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ARFGAP3Q9NP61 516 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 MLXIPLQ9NP71 852 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 HAUS2Q9NVX0 235 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TAS2R14Q9NYV8 317 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 LUZP4Q9P127 313 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF624Q9P2J8 865 aaPredicted RBP7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 SRPK3Q9UPE1 567 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 DNAJC16Q9Y2G8 782 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 TTLL3Q9Y4R7 772 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 PCDHGB7Q9Y5F8 929 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 DOPEY1Q5JWR5 2465 aa7.81□□□□□ -1.16
NSMCE2-213ENST00000523824 CACNA1DQ01668 2161 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms