RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 PDK1Q15118 436 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 PRKD1Q15139 912 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 NOMO1Q15155 1222 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 INAVAQ3KP66 663 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RALGPS1Q5JS13 557 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 TPRG1LQ5T0D9 272 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 FAM182AQ5T1J6 154 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 N4BP2L1Q5TBK1 243 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 ATG16L1Q676U5 607 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CGB2Q6NT52 195 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 TLDC1Q6P9B6 456 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 Q6ZSR6 202 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 C3orf62Q6ZUJ4 267 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 BZW1Q7L1Q6 419 aaKnown RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 GATAD2AQ86YP4 633 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CDKL3Q8IVW4 592 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 LMNTD2Q8IXW0 634 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 OXR1Q8N573 874 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 TP53I13Q8NBR0 393 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CCNYQ8ND76 341 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 MCUQ8NE86 351 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 BAHD1Q8TBE0 780 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 AGAP11Q8TF27 550 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 SETD7Q8WTS6 366 aaKnown RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 PDCD6IPQ8WUM4 868 aaKnown RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 C10orf82Q8WW14 230 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CPT1BQ92523 772 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 ZNF75CPQ92670 426 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 KLHDC7BQ96G42 594 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 BMFQ96LC9 184 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RMDN2Q96LZ7 410 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 LENG8Q96PV6 779 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 IL12RB2Q99665 862 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 TMEM121Q9BTD3 319 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 C1QTNF7Q9BXJ2 289 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 CEP41Q9BYV8 373 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 MYLK2Q9H1R3 596 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 STN1Q9H668 368 aaKnown RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 DCLRE1BQ9H816 532 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 MANSC1Q9H8J5 431 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 ERVMER34-1Q9H9K5 563 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RNPEPL1Q9HAU8 725 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 MBNL1Q9NR56 388 aaKnown RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RBM22Q9NW64 420 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 SEPT10Q9P0V9 454 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 SAE1Q9UBE0 346 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 PCDHGC4Q9Y5F7 938 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 RAI2Q9Y5P3 530 aa6.79□□□□□ -1.32
SPIDR-218ENST00000522222 NPIPB15A6NHN6 443 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 PCNX2A6NKB5 2137 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 A8MX80 341 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FPGTO14772 594 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SPAG7O75391 227 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 HAUS5O94927 633 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 JCHAINP01591 159 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 PCCBP05166 539 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 MMP2P08253 660 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 KRT16P08779 473 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 RBP3P10745 1247 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 NEFHP12036 1026 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CREB1P16220 341 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 GM2AP17900 193 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 TPSB2P20231 275 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 LHCGRP22888 699 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CALRP27797 417 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 PMLP29590 882 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 VIPR1P32241 457 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FOXN2P32314 431 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 RPA3P35244 121 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 RPL22P35268 128 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 GRK6P43250 576 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 RABIFP47224 123 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 RXRGP48443 463 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 NR2C2P49116 596 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ARRB1P49407 418 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 KCNJ2P63252 427 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 BASP1P80723 227 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SIM1P81133 766 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CDK16Q00536 496 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FOXK2Q01167 660 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SLC18A2Q05940 514 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ITKQ08881 620 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 AP1B1Q10567 949 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FZD2Q14332 565 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 PTPRRQ15256 657 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 TPSAB1Q15661 275 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CNGA3Q16281 694 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 WSCD2Q2TBF2 565 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 UBAP2Q5T6F2 1119 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ARMC12Q5T9G4 340 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 C6orf163Q5TEZ5 329 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ANKRD20A3Q5VUR7 823 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ZNF449Q6P9G9 518 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms