RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 WNT1P04628 370 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 RALBP11234 206 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 H2AFXP16104 143 aaPredicted RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 ZNF7P17097 686 aaPredicted RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 MSH3P20585 1137 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 HTR1BP28222 390 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 AKT1P31749 480 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 HOXD12P35452 270 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 NSG1P42857 185 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 LEPRP48357 1165 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 AFF3P51826 1226 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 THOP1P52888 689 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 PDE1CQ14123 709 aaPredicted RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 PTK2BQ14289 1009 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 KLHL38Q2WGJ6 581 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 KHDC1Q4VXA5 237 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 BEND6Q5SZJ8 279 aaPredicted RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 PACS1Q6VY07 963 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 MARK2Q7KZI7 788 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 CTAGE3PQ8IX95 158 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 ABCA7Q8IZY2 2146 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 PNPLA1Q8N8W4 532 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 UHMK1Q8TAS1 419 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 SKA1Q96BD8 255 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 DCUN1D1Q96GG9 259 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 ZCCHC2Q9C0B9 1178 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 TMEM74BQ9NUR3 256 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 VPS18Q9P253 973 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 SLC17A6Q9P2U8 582 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 RAB23Q9ULC3 237 aa17.61■□□□□ 0.41
SDC2-205ENST00000520233 ATXN2Q99700 1313 aaKnown RBP17.61■□□□□ 0.41
SDC2-205ENST00000520233 TLR4O00206 839 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 VILLO15195 856 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 MTX2O75431 263 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 PIAS1O75925 651 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 EPN2O95208 641 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 MPP1Q00013 466 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 B4GALNT1Q00973 533 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 TMEM115Q12893 351 aaPredicted RBP17.6■□□□□ 0.41
SDC2-205ENST00000520233 TEAD4Q15561 434 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 ZNF648Q5T619 568 aaPredicted RBP17.6■□□□□ 0.41
SDC2-205ENST00000520233 MACC1Q6ZN28 852 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 RABEPKQ7Z6M1 372 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 ADGRG6Q86SQ4 1221 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 LRRC6Q86X45 466 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 SLC22A18ASQ8N1D0 253 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 PPM1NQ8N819 430 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 LPGAT1Q92604 370 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 PIGKQ92643 395 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 WDR92Q96MX6 357 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 CPNE1Q99829 537 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 BOCQ9BWV1 1114 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 FBXO6Q9NRD1 293 aaPredicted RBP17.6■□□□□ 0.41
SDC2-205ENST00000520233 ATXN10Q9UBB4 475 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 SLC17A4Q9Y2C5 497 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 TMEM98Q9Y2Y6 226 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 FANCMQ8IYD8 2048 aa17.6■□□□□ 0.41
SDC2-205ENST00000520233 TNRC6BQ9UPQ9 1833 aaKnown RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 SPTY2D1-AS1A0A0U1RR47 76 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 TMEM202A6NGA9 273 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 GPR89AB7ZAQ6 455 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 PRMT5O14744 637 aaPredicted RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 TNFRSF10CO14798 259 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 CDK14O94921 469 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 HAUS5O94927 633 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 ASMTLO95671 621 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 AHSGP02765 367 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 CEACAM5P06731 702 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 NUDT17P0C025 328 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 GPR89BP0CG08 455 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 ATP1B2P14415 290 aaPredicted RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 RPS3P23396 243 aaKnown RBP eCLIP17.59■□□□□ 0.411e-17■■■■□ 23.6
SDC2-205ENST00000520233 GABRB3P28472 473 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 CSNK1EP49674 416 aaKnown RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 ADARP55265 1226 aaKnown RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 ILF2Q12905 390 aaKnown RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 GTF2H3Q13889 308 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 EFTUD2Q15029 972 aaKnown RBP eCLIP17.59■□□□□ 0.415e-9■□□□□ 9.8
SDC2-205ENST00000520233 LPAL2Q16609 132 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 ZNF789Q5FWF6 425 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 TPRG1LQ5T0D9 272 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 DOK6Q6PKX4 331 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 STRA8Q7Z7C7 330 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 OR56A4Q8NGH8 313 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 CEP76Q8TAP6 659 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 CCDC97Q96F63 343 aaPredicted RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 CCDC77Q9BR77 488 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 OR2AG1Q9H205 316 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 P2RY12Q9H244 342 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 RMI1Q9H9A7 625 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 TXNDC16Q9P2K2 825 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 SMG5Q9UPR3 1016 aaKnown RBP17.59■□□□□ 0.41
SDC2-205ENST00000520233 PCDHGA5Q9Y5G8 931 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 PSAT1Q9Y617 370 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 PLXNB3Q9ULL4 1909 aa17.59■□□□□ 0.41
SDC2-205ENST00000520233 EXOC1LA0A1B0GW35 172 aa17.58■□□□□ 0.4
SDC2-205ENST00000520233 NUAK1O60285 661 aa17.58■□□□□ 0.4
SDC2-205ENST00000520233 OR1I1O60431 355 aa17.58■□□□□ 0.4
SDC2-205ENST00000520233 AP2A2O94973 939 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms