RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 HAUS6Q7Z4H7 955 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 SERINC5Q86VE9 423 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 CREBRFQ8IUR6 639 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 CCDC60Q8IWA6 550 aaPredicted RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 RFLNBQ8N5W9 214 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 CSGALNACT2Q8N6G5 542 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 EXD3Q8N9H8 876 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 RNF149Q8NC42 400 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 KLHDC9Q8NEP7 349 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 ZNF397Q8NF99 534 aaPredicted RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 ENGASEQ8NFI3 743 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 PHOSPHO2Q8TCD6 241 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 URGCPQ8TCY9 931 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 PRPF31Q8WWY3 499 aaKnown RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 POMGNT1Q8WZA1 660 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 TAF4BQ92750 862 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 KAT2AQ92830 837 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 RTP4Q96DX8 246 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 RPS6KC1Q96S38 1066 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 PLIN2Q99541 437 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 WDR77Q9BQA1 342 aaPredicted RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 BPIFA3Q9BQP9 254 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 REEP2Q9BRK0 252 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 C16orf70Q9BSU1 422 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 ABHD14AQ9BUJ0 271 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 MSTO1Q9BUK6 570 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 NUP58Q9BVL2 599 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 PANK2Q9BZ23 570 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 TRIM9Q9C026 710 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 FTOQ9C0B1 505 aaKnown RBP eCLIP1.95□□□□□ -2.1
CCNC-208ENST00000519617 FAM49AQ9H0Q0 323 aaPredicted RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 POLR3FQ9H1D9 316 aaPredicted RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 HIPK3Q9H422 1215 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 THAP9Q9H5L6 903 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 ASB7Q9H672 318 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 RETREG1Q9H6L5 497 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 DHX33Q9H6R0 707 aaKnown RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 RPF1Q9H9Y2 349 aaKnown RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 PLEKHA5Q9HAU0 1116 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 TBC1D23Q9NUY8 699 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 TYW1Q9NV66 732 aaKnown RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 TMEM51Q9NW97 253 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 ZNHIT6Q9NWK9 470 aaKnown RBP1.95□□□□□ -2.1
CCNC-208ENST00000519617 RGL1Q9NZL6 768 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 HDAC6Q9UBN7 1215 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 RWDD2AQ9UIY3 292 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 SLC8A2Q9UPR5 921 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 GINS2Q9Y248 185 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 DERAQ9Y315 318 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 PCDHB7Q9Y5E2 793 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.95□□□□□ -2.1
CCNC-208ENST00000519617 TRPV2Q9Y5S1 764 aa1.95□□□□□ -2.1
CCNC-208ENST00000519617 MYH15Q9Y2K3 1946 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 A0A087WZ62 844 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 A0A0U1RQF3 1178 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 A0A1B0GUA9 196 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 A0A1B0GVY2 172 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 PLSCR5A0PG75 271 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 FRMD3A2A2Y4 597 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 I6L893 689 aaPredicted RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 M0QZQ0 153 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 PES1O00541 588 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 OGTO15294 1046 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 SLC16A4O15374 487 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 P4HA2O15460 535 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 EXTL3O43909 919 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 CCNT2O60583 730 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 CNTN5O94779 1100 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 PIGRP01833 764 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 SNRNP70P08621 437 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 F7P08709 466 aaPredicted RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 CLTAP09496 248 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 SRGAP2BP0DMP2 458 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 ALADP13716 330 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 DARSP14868 501 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 NR2F2P24468 414 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 CCNE1P24864 410 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 MSNP26038 577 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 HOXC8P31273 242 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 SLC5A2P31639 672 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 RPL9P32969 192 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 PPM1AP35813 382 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 ARL2P36404 184 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 MTIF2P46199 727 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 GPC3P51654 580 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 CLCN3P51790 818 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 MFAP3P55082 362 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 GSDMDP57764 484 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 PTENP60484 403 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 BEX3Q00994 111 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 RNASELQ05823 741 aaKnown RBP1.94□□□□□ -2.1
CCNC-208ENST00000519617 SMARCB1Q12824 385 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 ILF3Q12906 894 aaKnown RBP eCLIP1.94□□□□□ -2.1
CCNC-208ENST00000519617 GPS1Q13098 491 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 TRPC3Q13507 836 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 PNOCQ13519 176 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 CUL4BQ13620 913 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 MORC3Q14149 939 aa1.94□□□□□ -2.1
CCNC-208ENST00000519617 POLD3Q15054 466 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms