RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 IFIH1Q9BYX4 1025 aaKnown RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 RTN4RQ9BZR6 473 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PABPC3Q9H361 631 aaKnown RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ESRP2Q9H6T0 727 aaKnown RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CHODLQ9H9P2 273 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 NOD2Q9HC29 1040 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ARFGAP3Q9NP61 516 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZNF71Q9NQZ8 489 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 DDX21Q9NR30 783 aaKnown RBP eCLIP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 BEX4Q9NWD9 120 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 COQ3Q9NZJ6 369 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 VSIG4Q9Y279 399 aa0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZNF256Q9Y2P7 627 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ASTN2O75129 1339 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1258P-201ENST00000516911 MYH15Q9Y2K3 1946 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 KIAA1210Q9ULL0 1709 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 H0Y3Z8 333 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TSPAN6O43657 245 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 IDH3BO43837 385 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 SYNCRIPO60506 623 aaKnown RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZFAND5O76080 213 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CSPG5O95196 566 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 C22orf31O95567 290 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 IGKV3-11P04433 115 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ABCB4P21439 1286 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 FASLGP48023 281 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CDH11P55287 796 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CLDN2P57739 230 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CDR2Q01850 454 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 MAD2L1Q13257 205 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 DRP2Q13474 957 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 NAA25Q14CX7 972 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TAF13Q15543 124 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 LONRF1Q17RB8 773 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CBWD5Q5RIA9 395 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 FRG2Q64ET8 278 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 C18orf63Q68DL7 685 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ANKRD54Q6NXT1 300 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 INTS8Q75QN2 995 aaKnown RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 RTN4RL2Q86UN3 420 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 NOXA1Q86UR1 476 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 HACE1Q8IYU2 909 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PRR22Q8IZ63 422 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 DNAJC22Q8N4W6 341 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 GBGT1Q8N5D6 347 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 OR2C3Q8N628 320 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZNF527Q8NB42 609 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 OR5R1Q8NH85 324 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 HUS1BQ8NHY5 278 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TTC8Q8TAM2 541 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 HMGCLL1Q8TB92 370 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 SPPL3Q8TCT6 385 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 UTP15Q8TED0 518 aaKnown RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 AFG1LQ8WV93 481 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 KTI12Q96EK9 354 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 LTV1Q96GA3 475 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PRAC1Q96KF2 57 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TNIP3Q96KP6 325 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 HARBI1Q96MB7 349 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 KRT12Q99456 494 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 FUCA2Q9BTY2 467 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 WWTR1Q9GZV5 400 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 USP44Q9H0E7 712 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TKTL2Q9H0I9 626 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ASB8Q9H765 288 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 OBP2BQ9NPH6 170 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ERAP1Q9NZ08 941 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CHPF2Q9P2E5 772 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CD207Q9UJ71 328 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 LSM4Q9Y4Z0 139 aaKnown RBP0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 EID1Q9Y6B2 187 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PRAG1Q86YV5 1406 aa0.87□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ANKRD62A6NC57 917 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TRIM49BA6NDI0 452 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PABPN1LA6NDY0 278 aaKnown RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CBY3A6NI87 242 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 FAM90A20PA6NIJ5 464 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 TTC36A6NLP5 189 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PLK4O00444 970 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 PER2O15055 1255 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 GPRIN2O60269 458 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 GPR137BO60478 399 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 BMP10O95393 424 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 LIPFP07098 398 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 MELTFP08582 738 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CYP21A2P08686 494 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 NBPF7P0C2Y1 421 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 FDPSP14324 419 aaKnown RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 AGAP20933 346 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 UBA7P41226 1012 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 MTHFRP42898 656 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 AK2P54819 239 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 GSDMDP57764 484 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 RPS18P62269 152 aaKnown RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZFP36L1Q07352 338 aaKnown RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 SMAD1Q15797 465 aaKnown RBP0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 C2orf68Q2NKX9 166 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 ZNF766Q5HY98 468 aa0.86□□□□□ -2.27
RNU6-1258P-201ENST00000516911 CYP4A22Q5TCH4 519 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms