RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 PRPF4O43172 522 aaKnown RBP eCLIP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HOXA2O43364 376 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EIF4E2O60573 245 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC24A1O60721 1099 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SH2D1AO60880 128 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FCGR3BO75015 233 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TSC22D2O75157 780 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SS18L1O75177 396 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NDUFS2O75306 463 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CDH16O75309 829 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SERPINB7O75635 380 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GJB3O75712 270 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KRT37O76014 449 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HEXIM1O94992 359 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NXPH3O95157 252 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NDUFB8O95169 186 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CDRT1O95170 752 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KLHL2O95198 593 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EPN2O95208 641 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GLUD1P00367 558 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HPRP00739 348 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 F9P00740 461 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 F10P00742 488 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CYBBP04839 570 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ENO1P06733 434 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PRSS2P07478 247 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HSP90AA1P07900 732 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RHOXF2BP0C7M4 288 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SUPT20HL2P0C7V6 817 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C8orf88P0DMB2 117 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GZMBP10144 247 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MYBP10242 640 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CHRM1P11229 460 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ERGP11308 486 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ALAS1P13196 640 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RARGP13631 454 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACPPP15309 386 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF25P17030 456 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 EIF2AK2P19525 551 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FGFR2P21802 821 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UGT1A4P22310 534 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GPX3P22352 226 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 USF1P22415 310 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PRKCHP24723 683 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DDX6P26196 483 aaKnown RBP eCLIP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TYK2P29597 1187 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MIPP30301 263 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UQCRC1P31930 480 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM23P36406 574 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CD79BP40259 229 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FOLR3P41439 243 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ASPAP45381 313 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MAPK9P45984 424 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NOP2P46087 812 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC6A12P48065 614 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TFPI2P48307 235 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RFX2P48378 723 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC4A3P48751 1232 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPINT3P49223 89 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ARL4DP49703 201 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GSK3BP49841 420 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CLCN4P51793 760 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CASP5P51878 434 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PMS1P54277 932 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RRADP55042 308 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PAX9P55771 341 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PER3P56645 1201 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMPRSS3P57727 454 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RPS11P62280 158 aaKnown RBP eCLIP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACTA2P62736 377 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACTC1P68032 377 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TUBA1BP68363 451 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMF1P82094 1093 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TNFAIP6P98066 277 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CYP4F8P98187 520 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATP2C1P98194 919 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATP8B2P98198 1209 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 COX6A2Q02221 97 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ID2Q02363 134 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GHRHRQ02643 423 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GRIN1Q05586 938 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PTPN11Q06124 597 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BTKQ06187 659 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 Q0VFX4 171 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MYO1EQ12965 1108 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SNTB2Q13425 540 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MAMLD1Q13495 774 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CAMK2GQ13555 558 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LAPTM5Q13571 262 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HTR4Q13639 388 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TPBGQ13641 420 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ALCAMQ13740 583 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TUBB2AQ13885 445 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FASTKQ14296 549 aaKnown RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NAA30Q147X3 362 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PTGR1Q14914 329 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATXN7L3Q14CW9 347 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RALBP1Q15311 655 aa-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SURF2Q15527 256 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIP10Q15642 601 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms