RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 THOP1P52888 689 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 PTK2BQ14289 1009 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 LAIR1Q6GTX8 287 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 PACS1Q6VY07 963 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 MACC1Q6ZN28 852 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 SLC26A11Q86WA9 606 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 RBFAQ8N0V3 343 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 C2CD4AQ8NCU7 369 aaPredicted RBP20.77■□□□□ 0.92
LSM6-207ENST00000515311 GDAP1Q8TB36 358 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 HNRNPLLQ8WVV9 542 aaKnown RBP20.77■□□□□ 0.92
LSM6-207ENST00000515311 PIGKQ92643 395 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 CYTH2Q99418 400 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 TMEM74BQ9NUR3 256 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 RABGEF1Q9UJ41 708 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 FBXO5Q9UKT4 447 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 SMG5Q9UPR3 1016 aaKnown RBP20.77■□□□□ 0.92
LSM6-207ENST00000515311 PCDHGA5Q9Y5G8 931 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 OAS3Q9Y6K5 1087 aaKnown RBP20.77■□□□□ 0.92
LSM6-207ENST00000515311 MUC6Q6W4X9 2439 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 ATXN2Q99700 1313 aaKnown RBP20.77■□□□□ 0.91
LSM6-207ENST00000515311 LRP4O75096 1905 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 CFAP99D6REC4 459 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 TLR4O00206 839 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 WNT1P04628 370 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 RALBP11234 206 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 AKT1P31749 480 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 PDE1CQ14123 709 aaPredicted RBP20.76■□□□□ 0.91
LSM6-207ENST00000515311 KBTBD12Q3ZCT8 623 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 KHDC1Q4VXA5 237 aaKnown RBP20.76■□□□□ 0.91
LSM6-207ENST00000515311 TRIM74Q86UV6 250 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 DENND6AQ8IWF6 608 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 SLC22A18ASQ8N1D0 253 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 CEP76Q8TAP6 659 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 UBLCP1Q8WVY7 318 aaPredicted RBP20.76■□□□□ 0.91
LSM6-207ENST00000515311 DCUN1D1Q96GG9 259 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 WDR92Q96MX6 357 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 SLC17A4Q9Y2C5 497 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 SDK1Q7Z5N4 2213 aa20.76■□□□□ 0.91
LSM6-207ENST00000515311 CACNA1EQ15878 2313 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 SPTY2D1-AS1A0A0U1RR47 76 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 TNFRSF10CO14798 259 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 NDUFS3O75489 264 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 S1PR4O95977 384 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 ZNF7P17097 686 aaPredicted RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 MSH3P20585 1137 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 HSD17B3P37058 310 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 NSG1P42857 185 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 ADARP55265 1226 aaKnown RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 TMEM115Q12893 351 aaPredicted RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 CTBP1Q13363 440 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 SLC29A2Q14542 456 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 UAP1Q16222 522 aaPredicted RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 LPAL2Q16609 132 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 MARK2Q7KZI7 788 aaKnown RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 ADGRG6Q86SQ4 1221 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 LDB1Q86U70 411 aaPredicted RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 OR56A4Q8NGH8 313 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 LPGAT1Q92604 370 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 ATOH1Q92858 354 aaPredicted RBP20.75■□□□□ 0.91
LSM6-207ENST00000515311 RMI1Q9H9A7 625 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 SMYD2Q9NRG4 433 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 ATXN10Q9UBB4 475 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 VPS13AQ96RL7 3174 aa20.75■□□□□ 0.91
LSM6-207ENST00000515311 TMEM202A6NGA9 273 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 CXorf49A8MYA2 514 aaPredicted RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 CEACAM5P06731 702 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 NBL1P41271 181 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 LEPRP48357 1165 aaKnown RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 CSNK1EP49674 416 aaKnown RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 NXPH1P58417 271 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 B4GALNT1Q00973 533 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 ILF2Q12905 390 aaKnown RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 DUOXA1Q1HG43 343 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 KLHL38Q2WGJ6 581 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 TPRG1LQ5T0D9 272 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 LRRC6Q86X45 466 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 SUMF1Q8NBK3 374 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 SCARF2Q96GP6 870 aaPredicted RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 ZNF514Q96K75 400 aaPredicted RBP20.74■□□□□ 0.91
LSM6-207ENST00000515311 OR2AG1Q9H205 316 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 ARFGAP3Q9NP61 516 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 PI4KAP42356 2102 aa20.74■□□□□ 0.91
LSM6-207ENST00000515311 PRMT5O14744 637 aaPredicted RBP20.73■□□□□ 0.91
LSM6-207ENST00000515311 MTX2O75431 263 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 CDK14O94921 469 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 AP2A2O94973 939 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 ASMTLO95671 621 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 ATP1B2P14415 290 aaPredicted RBP20.73■□□□□ 0.91
LSM6-207ENST00000515311 RPS3P23396 243 aaKnown RBP eCLIP20.73■□□□□ 0.91
LSM6-207ENST00000515311 C21orf59P57076 290 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 MPP1Q00013 466 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 GTF2H3Q13889 308 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 FZD2Q14332 565 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 ZNF648Q5T619 568 aaPredicted RBP20.73■□□□□ 0.91
LSM6-207ENST00000515311 LAYNQ6UX15 382 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 CTAGE3PQ8IX95 158 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 PNPLA1Q8N8W4 532 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 RASGEF1AQ8N9B8 481 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 CPNE1Q99829 537 aa20.73■□□□□ 0.91
LSM6-207ENST00000515311 BOCQ9BWV1 1114 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms