RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 AQP12BA6NM10 295 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 PPP6CO00743 305 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 DNAJA2O60884 412 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 NIPSNAP2O75323 286 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 UPP2O95045 317 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 PGLSO95336 258 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 MT-CO1P00395 513 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 NPPAP01160 153 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 CYBBP04839 570 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 URODP06132 367 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 LINC00032P0C843 101 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 ZNF7P17097 686 aaPredicted RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 MZF1P28698 734 aaPredicted RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 CDKN1CP49918 316 aaPredicted RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 SLC7A2P52569 658 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 FOXA1P55317 472 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 CCL23P55773 120 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 CREMQ03060 361 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 CDH18Q13634 790 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 GRB7Q14451 532 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 RBBP7Q16576 425 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 PDCD4Q53EL6 469 aaKnown RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 XKR7Q5GH72 579 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 LINGO4Q6UY18 593 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 SPNS2Q8IVW8 549 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 AQP12AQ8IXF9 295 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 SLC39A11Q8N1S5 342 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 SIDT2Q8NBJ9 832 aaKnown RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 OR9I1Q8NGQ6 314 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 EEF1AKMT1Q8WVE0 214 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 ACDQ96AP0 544 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 ALG14Q96F25 216 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 ZFRQ96KR1 1074 aaKnown RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 TRIM54Q9BYV2 358 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 GPBP1L1Q9HC44 474 aaPredicted RBP14.72□□□□□ -0.05
NUP54-217ENST00000514987 AIG1Q9NVV5 245 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 PLK2Q9NYY3 685 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 APPL1Q9UKG1 709 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 PCDHB9Q9Y5E1 797 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 GPR45Q9Y5Y3 372 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 SCN5AQ14524 2016 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 A0A1W2PP18 115 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 AHCYL1O43865 530 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 OR1I1O60431 355 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 SOCS5O75159 536 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 RNASEH2AO75792 299 aaKnown RBP14.71□□□□□ -0.05
NUP54-217ENST00000514987 OLFM2O95897 454 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 FESP07332 822 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 HDCP19113 662 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 RGS4P49798 205 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 CLCN7P51798 805 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 PTPN5P54829 565 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 KCNK10P57789 538 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 ERVK-8P63133 956 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 INPP5AQ14642 412 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 PCBP2Q15366 365 aaKnown RBP eCLIP14.71□□□□□ -0.052e-6■■■■■ 27.6
NUP54-217ENST00000514987 CRY1Q16526 586 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 MPP7Q5T2T1 576 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 RNF220Q5VTB9 566 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 IL23RQ5VWK5 629 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.71□□□□□ -0.054e-6■□□□□ 8.6
NUP54-217ENST00000514987 Q6ZNB5 142 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 SYVN1Q86TM6 617 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 RBFAQ8N0V3 343 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 FAM156AQ8NDB6 213 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 OR2T34Q8NGX1 318 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 OR2T3Q8NH03 318 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 GRIN3AQ8TCU5 1115 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 ATP6V1E2Q96A05 226 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 TOX2Q96NM4 488 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 BRINP2Q9C0B6 783 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 CLPBQ9H078 707 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 PCDHAC1Q9H158 963 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 BPIFA1Q9NP55 256 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.71□□□□□ -0.05
NUP54-217ENST00000514987 ARMC1Q9NVT9 282 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 SMPD4Q9NXE4 827 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 ZIM2Q9NZV7 527 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 MAP10Q9P2G4 905 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 GNPTGQ9UJJ9 305 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 IKZF3Q9UKT9 509 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 PLXNA4Q9HCM2 1894 aa14.71□□□□□ -0.05
NUP54-217ENST00000514987 C15orf38-AP3S2A0A0A6YYH1 394 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 KIF3CO14782 793 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 RAD51BO15315 384 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 ARSAP15289 507 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 LAG3P18627 525 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 RFC2P35250 354 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 CSKP41240 450 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 BCL2L1Q07817 233 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 TLR1Q15399 786 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 TGFBIQ15582 683 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 LIN52Q52LA3 116 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 PTRHD1Q6GMV3 140 aaKnown RBP14.7□□□□□ -0.06
NUP54-217ENST00000514987 METTL2BQ6P1Q9 378 aaKnown RBP14.7□□□□□ -0.06
NUP54-217ENST00000514987 LAYNQ6UX15 382 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 PRR23BQ6ZRT6 265 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 FRA10AC1Q70Z53 315 aa14.7□□□□□ -0.06
NUP54-217ENST00000514987 ARPINQ7Z6K5 226 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms