RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PAIP1Q9H074 479 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 TASP1Q9H6P5 420 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 MAP6D1Q9H9H5 199 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 SEMA4BQ9NPR2 832 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 DDX4Q9NQI0 724 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 PRMT8Q9NR22 394 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ATP8A2Q9NTI2 1148 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 CYP46A1Q9Y6A2 500 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 AKAP13Q12802 2813 aa3.72□□□□□ -1.81
TOPBP1-208ENST00000511439 ASTN1O14525 1302 aa3.71□□□□□ -1.81
TOPBP1-208ENST00000511439 TET1Q8NFU7 2136 aa3.71□□□□□ -1.81
TOPBP1-208ENST00000511439 MYO7AQ13402 2215 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 A0A087WV48 116 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 GOLGA6L10A0A0M3HER8 536 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 C17orf113A0A1B0GUU1 675 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 B4DGG1 531 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TEX22C9J3V5 150 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 EPB41L2O43491 1005 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 EPN2O95208 641 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 DDX58O95786 925 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ADAP00813 363 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 SERPINC1P01008 464 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 LINC00271P0C7V0 271 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ZNF806P0C7X5 589 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 PSG1P11464 419 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 UNGP13051 313 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 CD72P21854 359 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 DNAJB1P25685 340 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ELF1P32519 619 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TNFSF8P32971 234 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ALDH7A1P49419 539 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 CLCNKBP51801 687 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 MPP1Q00013 466 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 GAD2Q05329 585 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ERV3-1Q14264 604 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 GPNMBQ14956 572 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 GPR68Q15743 365 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 PRICKLE4Q2TBC4 344 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ZNF766Q5HY98 468 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 MANEAQ5SRI9 462 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 UBAP2Q5T6F2 1119 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 DCLRE1AQ6PJP8 1040 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TSSK4Q6SA08 328 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TRIM74Q86UV6 250 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TRIM73Q86UV7 250 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 MMP21Q8N119 569 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 DPP10Q8N608 796 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 ZNF548Q8NEK5 533 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TMEM174Q8WUU8 243 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 RUFY2Q8WXA3 655 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 HSPH1Q92598 858 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 CASP10Q92851 521 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 RNF125Q96EQ8 232 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 APOPT1Q96IL0 206 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 THOC3Q96J01 351 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 SIN3AQ96ST3 1273 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 MTG1Q9BT17 334 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 EDEM2Q9BV94 578 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC26A6Q9BXS9 759 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM234AQ9H0X4 552 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 UNC45AQ9H3U1 944 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 CXorf56Q9H5V9 222 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 PANK3Q9H999 370 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 PREBQ9HCU5 417 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 FZD3Q9NPG1 666 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC25A10Q9UBX3 287 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 IL17BQ9UHF5 180 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 Q9Y3F1 56 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 KNSTRNQ9Y448 316 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC4A4Q9Y6R1 1079 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 PATJQ8NI35 1801 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 MICAL3Q7RTP6 2002 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 COL12A1Q99715 3063 aa3.71□□□□□ -1.82
TOPBP1-208ENST00000511439 TMEM272A0A1B0GTI8 110 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 C17orf102A2RUQ5 167 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 GAGE10A6NGK3 116 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 SHISA7A6NL88 538 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM157AC9JC47 383 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 MDM4O15151 490 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 NDUFB8O95169 186 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 TOMM40O96008 361 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 IFNA2P01563 188 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 KLKB1P03952 638 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 HOXB7P09629 217 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 T-ENOLP0DO92 83 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 ATP1A3P13637 1013 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 TNFRSF1BP20333 461 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 DPP6P42658 865 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 HTR6P50406 440 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 CDH15P55291 814 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 STARD6P59095 220 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 RPP30P78346 268 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 GALNT2Q10471 571 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 DDX10Q13206 875 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 KCNC3Q14003 757 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 BTG3Q14201 252 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 LY6DQ14210 128 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 GCKRQ14397 625 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 PTGISQ16647 500 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 COLCA1Q6ZS62 124 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms