RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 HERPUD2Q9BSE4 406 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 OR2AG1Q9H205 316 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 FAM83DQ9H4H8 585 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 KLC4Q9NSK0 619 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 SPO11Q9Y5K1 396 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
DDX41-206ENST00000506965 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
DDX41-206ENST00000506965 C3orf70A6NLC5 250 aaPredicted RBP13.18□□□□□ -0.3
DDX41-206ENST00000506965 GPR39O43194 453 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 JCHAINP01591 159 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 RNF224P0DH78 156 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 SEPHS1P49903 392 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 CLCNKAP51800 687 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 LAMB3Q13751 1172 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 NOMO1Q15155 1222 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 IFI16Q16666 785 aaKnown RBP13.18□□□□□ -0.3
DDX41-206ENST00000506965 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 CCDC183Q5T5S1 534 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 CERS6Q6ZMG9 384 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 LRRC49Q8IUZ0 686 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 NSMCE1Q8WV22 266 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 HDAC11Q96DB2 347 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 CARD9Q9H257 536 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 ANAPC2Q9UJX6 822 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 WDR37Q9Y2I8 494 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 UNC79Q9P2D8 2635 aa13.18□□□□□ -0.3
DDX41-206ENST00000506965 SNRNP200O75643 2136 aaKnown RBP13.18□□□□□ -0.3
DDX41-206ENST00000506965 SEC16AO15027 2179 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 KIR2DS5A0A0G2JLQ3 304 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 A0A0G2JNG1 304 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 OR52A4PA6NMU1 304 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 KIR2DS3K7RE56 304 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 POLR1CO15160 346 aaPredicted RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 ZW10O43264 779 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 DNAJB5O75953 348 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 PYGLP06737 847 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 XRCC1P18887 633 aaPredicted RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 NFKBIAP25963 317 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 UQCRFS1P47985 274 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 MLLT10P55197 1068 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 RPL26P61254 145 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 MAP7Q14244 749 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 KIR2DS5Q14953 304 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 SEPT7Q16181 437 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 CRTC2Q53ET0 693 aaPredicted RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 RAVER1Q8IY67 606 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 GPR150Q8NGU9 434 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 APOBEC4Q8WW27 367 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 TRIM55Q9BYV6 548 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 RMI1Q9H9A7 625 aa13.17□□□□□ -0.3
DDX41-206ENST00000506965 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
DDX41-206ENST00000506965 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 KIAA0754O94854 1291 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 BPIP17213 487 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 TCN2P20062 427 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 RPL10P27635 214 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 DLSTP36957 453 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 CD97P48960 835 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 DRG2P55039 364 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 PPIDQ08752 370 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 PEX6Q13608 980 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ERV3-1Q14264 604 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 GPR18Q14330 331 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 CCDC122Q5T0U0 273 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 SPATA22Q8NHS9 363 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 GLYATL1Q969I3 302 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 IMP4Q96G21 291 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 OR6C1Q96RD1 312 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ZPBPQ9BS86 351 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ULBP3Q9BZM4 244 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 OSGEPL1Q9H4B0 414 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ZNF768Q9H5H4 540 aaKnown RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 UCK1Q9HA47 277 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 NFKBIL1Q9UBC1 381 aaPredicted RBP13.16□□□□□ -0.3
DDX41-206ENST00000506965 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 DNAJC16Q9Y2G8 782 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
DDX41-206ENST00000506965 ITPR2Q14571 2701 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms