RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PRAMEF10O60809 474 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 GGCTO75223 188 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ARL6IP5O75915 188 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PAHP00439 452 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ADAP00813 363 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 LTA4HP09960 611 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RPS2P15880 293 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PEX2P28328 305 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ATP5C1P36542 298 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CTDSPL2Q05D32 466 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FGL2Q14314 439 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 TAF12Q16514 161 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 DCAF4L1Q3SXM0 396 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 C6orf183Q5T699 404 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 C1orf189Q5VU69 101 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 OTUD7BQ6GQQ9 843 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PKN3Q6P5Z2 889 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 THEM5Q8N1Q8 247 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 GAB3Q8WWW8 586 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 MAFIPQ8WZ33 124 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 C11orf70Q9BRQ4 267 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CRISPLD1Q9H336 500 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RHOJQ9H4E5 214 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 EMC7Q9NPA0 242 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SNTG2Q9NY99 539 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SLC7A8Q9UHI5 535 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SNX6Q9UNH7 406 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 KDM3BQ7LBC6 1761 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 LCMT2O60294 686 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RFPL1O75677 317 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 OTCP00480 354 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CDH13P55290 713 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CHRNEQ04844 493 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 BST1Q10588 318 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RIN1Q13671 783 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 DAG1Q14118 895 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FAM102AQ5T9C2 384 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SCML4Q8N228 414 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FSTL5Q8N475 847 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PLD5Q8N7P1 536 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SEMA6DQ8NFY4 1073 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SPATA13Q96N96 652 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PANX3Q96QZ0 392 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CENPOQ9BU64 300 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FAM83DQ9H4H8 585 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 GTF2IRD1Q9UHL9 959 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CMAHPQ9Y471 501 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CNTNAP5Q8WYK1 1306 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 KAT6AQ92794 2004 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 AGAP5A6NIR3 686 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 H0Y858 1186 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 POLR1CO15160 346 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 GKN3PP0CG01 181 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CBX5P45973 191 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SLC26A2P50443 739 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 DNAJB13P59910 316 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 IFI35P80217 286 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 IL18Q14116 193 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ZNF746Q6NUN9 644 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ZNF548Q8NEK5 533 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 TTYH2Q9BSA4 534 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FUNDC2Q9BWH2 189 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ACTR10Q9NZ32 417 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 TSR3Q9UJK0 312 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CASKO14936 926 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 SCNN1AP37088 669 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 BTN3A2P78410 334 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RBP5P82980 135 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 POU4F2Q12837 409 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 TARDBPQ13148 414 aaKnown RBP eCLIP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PROX2Q3B8N5 592 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 MCOLN2Q8IZK6 566 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ZNF431Q8TF32 576 aaPredicted RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 OR2M2Q96R28 347 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ATP13A3Q9H7F0 1226 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CD300AQ9UGN4 299 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 NPIPA7E9PJI5 369 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 NPIPA8P0DM63 369 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 HK1P19367 917 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CPN2P22792 545 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CXCR2P25025 360 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 HLA-DMAP28067 261 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 DNAJA1P31689 397 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 GLRBP48167 497 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 LSM12Q3MHD2 195 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FAM111BQ6SJ93 734 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 PID1Q7Z2X4 250 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 LAPTM4BQ86VI4 370 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 KCNMB4Q86W47 210 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 CPSF7Q8N684 471 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 ADAM2Q99965 735 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 LYARQ9NX58 379 aaKnown RBP6.04□□□□□ -1.44
LINC02397-201ENST00000504409 RIMKLBQ9ULI2 386 aa6.04□□□□□ -1.44
LINC02397-201ENST00000504409 FABP12A6NFH5 140 aa6.03□□□□□ -1.44
LINC02397-201ENST00000504409 SLC22A3O75751 556 aa6.03□□□□□ -1.44
LINC02397-201ENST00000504409 PRKAR2AP13861 404 aaKnown RBP6.03□□□□□ -1.44
LINC02397-201ENST00000504409 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
LINC02397-201ENST00000504409 RRM1P23921 792 aa6.03□□□□□ -1.44
LINC02397-201ENST00000504409 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms