RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ZNF555Q8NEP9 628 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 RORBQ92753 470 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF419Q96HQ0 510 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MAELQ96JY0 434 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 AMBRA1Q9C0C7 1298 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DNAI2Q9GZS0 605 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TUBB1Q9H4B7 451 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GSTO2Q9H4Y5 243 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CARS2Q9HA77 564 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MEAF6Q9HAF1 191 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ZBTB20Q9HC78 741 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TLR9Q9NR96 1032 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TRMT13Q9NUP7 481 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GIMAP4Q9NUV9 329 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 NDFIP2Q9NV92 336 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MPP6Q9NZW5 540 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 POLG2Q9UHN1 485 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 XIRP2A4UGR9 3374 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 HACD1B0YJ81 288 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 H3BRB1 525 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 IDH3BO43837 385 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 LCKP06239 509 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 LTA4HP09960 611 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 IFI30P13284 250 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 AZGP1P25311 298 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ADRA1BP35368 520 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 BMPR1AP36894 532 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ATP6V0D1P61421 351 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 EMX1Q04741 257 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 BST2Q10589 180 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GRM1Q13255 1194 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PPIL2Q13356 520 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 NAB1Q13506 487 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TECRLQ5HYJ1 363 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 REM2Q8IYK8 340 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 FNDC5Q8NAU1 212 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PPHLN1Q8NEY8 458 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 OR10A6Q8NH74 314 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MCFD2Q8NI22 146 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CALML6Q8TD86 181 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 AURKBQ96GD4 344 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DOK1Q99704 481 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TBL1YQ9BQ87 522 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 RUBCNLQ9H714 662 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 SCUBE2Q9NQ36 999 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TRPV5Q9NQA5 729 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 RBM22Q9NW64 420 aaKnown RBP eCLIP7.57□□□□□ -1.23e-8■■■■□ 25.4
NEDD9-208ENST00000504387 MARCH4Q9P2E8 410 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TNFSF13BQ9Y275 285 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 H0YJX3 145 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SOAT2O75908 522 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 RECQL4O94761 1208 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 LGALS2P05162 132 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CTSHP09668 335 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 TGM1P22735 817 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GLUD2P49448 558 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ARSDP51689 593 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GHRHRQ02643 423 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CHRNB3Q05901 458 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 RBBP7Q16576 425 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 SLC25A52Q3SY17 297 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 UNC50Q53HI1 259 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 HECTD2Q5U5R9 776 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GTF2IRD2BQ6EKJ0 949 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FAM45BPQ6NSW5 357 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 GTF2IRD2Q86UP8 949 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 BEST2Q8NFU1 509 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 FAM45AQ8TCE6 357 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM125Q96AQ2 219 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 BARD1Q99728 777 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 RNF39Q9H2S5 420 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CYP3A43Q9HB55 503 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 NTN4Q9HB63 628 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 HPS4Q9NQG7 708 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■□□□ 11.7
NEDD9-208ENST00000504387 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ANKRD6Q9Y2G4 727 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 PCM1Q15154 2024 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 AQP12BA6NM10 295 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 AZIN1O14977 448 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 NPHS1O60500 1241 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CD4P01730 458 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CYBBP04839 570 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 HRH2P25021 359 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 EPHA2P29317 976 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ADARB1P78563 741 aaKnown RBP7.56□□□□□ -1.2
NEDD9-208ENST00000504387 DAG1Q14118 895 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 CTF1Q16619 201 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 ARL13BQ3SXY8 428 aa7.56□□□□□ -1.2
NEDD9-208ENST00000504387 STEAP3Q658P3 488 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms