RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ELOCQ15369 112 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ZRSR2Q15696 482 aaKnown RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 MAN2A1Q16706 1144 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 NKPD1Q17RQ9 610 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ALG11Q2TAA5 492 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 SMTNL2Q2TAL5 461 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 AMZ1Q400G9 498 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 CCDC14Q49A88 953 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 VWA3BQ502W6 1294 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ZRANB3Q5FWF4 1079 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 KLHDC7AQ5VTJ3 777 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ZNF783Q6ZMS7 281 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 MACC1Q6ZN28 852 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 GDF7Q7Z4P5 450 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 TAF8Q7Z7C8 310 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 NLRP14Q86W24 1093 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 EGFL6Q8IUX8 553 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ELOA2Q8IYF1 753 aaPredicted RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 FAM71AQ8IYT1 594 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 OTUD6BQ8N6M0 293 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ARL10Q8N8L6 244 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 PLA2G15Q8NCC3 412 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 MSANTD4Q8NCY6 345 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 DENND6BQ8NEG7 585 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 BHLHE22Q8NFJ8 381 aaPredicted RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 SLC30A5Q8TAD4 765 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 GPT2Q8TD30 523 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 FAM172AQ8WUF8 416 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 ART4Q93070 314 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 RAB7BQ96AH8 199 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 CENPTQ96BT3 561 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 TBC1D31Q96DN5 1066 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 PDXPQ96GD0 296 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 GDAP1L1Q96MZ0 367 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 HAPLN3Q96S86 360 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 APOOQ9BUR5 198 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 TRIM55Q9BYV6 548 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 SLC29A3Q9BZD2 475 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 SPRY4Q9C004 299 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 NDST4Q9H3R1 872 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 RDH14Q9HBH5 336 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 MRPL40Q9NQ50 206 aaKnown RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 SEPT11Q9NVA2 429 aaKnown RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 TMEM51Q9NW97 253 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 TAB2Q9NYJ8 693 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 PPARGC1AQ9UBK2 798 aaKnown RBP5.53□□□□□ -1.52
SPTA1-209ENST00000498708 KLQ9UEF7 1012 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 KCTD3Q9Y597 815 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 COL6A5A8TX70 2615 aa5.53□□□□□ -1.52
SPTA1-209ENST00000498708 MDC1Q14676 2089 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 HEATR9A2RTY3 570 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 GTPBP10A4D1E9 387 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 LRRC10BA6NIK2 292 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 RASA4BC9J798 803 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 AREL1O15033 823 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TEX33O43247 280 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 LRRTM2O43300 516 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 RASA4O43374 803 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 B4GAT1O43505 415 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ZG16O60844 167 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 RFPL1O75677 317 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 FAM155BO75949 473 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TNFP01375 233 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 C8BP07358 591 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 PLEKP08567 350 aaPredicted RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ALPIP09923 528 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 HTR1BP28222 390 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 EPHB2P29323 1055 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CDH5P33151 784 aaPredicted RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 MAPKAPK2P49137 400 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 LIG3P49916 1009 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 HK3P52790 923 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 SRP54P61011 504 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ERV3-1Q14264 604 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 BECN1Q14457 450 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 NFATC4Q14934 902 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CYTH1Q15438 398 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF124Q15973 351 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 KCNMB1Q16558 191 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 WSCD2Q2TBF2 565 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM52BQ4KMG9 183 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 MIIPQ5JXC2 388 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CFAP58Q5T655 872 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 DENND2CQ68D51 928 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ANKS6Q68DC2 871 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 DPY19L2P1Q6NXN4 242 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 DNAJC14Q6Y2X3 702 aaPredicted RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 HDXQ7Z353 690 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 SPRED1Q7Z699 444 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 GKN2Q86XP6 184 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CAMK1DQ8IU85 385 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 NLGN4XQ8N0W4 816 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 FSTL5Q8N475 847 aaPredicted RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 FAM46DQ8NEK8 389 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 NLGN4YQ8NFZ3 816 aaPredicted RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CCL4L1Q8NHW4 92 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ASB12Q8WXK4 309 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 VOPP1Q96AW1 172 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms