RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TRIM23P36406 574 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PPARGP37231 505 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 MPLP40238 635 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 DPP6P42658 865 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 ABCG1P45844 678 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CSNK1EP49674 416 aaKnown RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 YPEL5P62699 121 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CTBP1Q13363 440 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 FRG1Q14331 258 aaKnown RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CCDC6Q16204 474 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TYSND1Q2T9J0 566 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PLA2G4EQ3MJ16 856 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 KBTBD12Q3ZCT8 623 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TPRG1LQ5T0D9 272 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 RNF187Q5TA31 235 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 LYPLAL1Q5VWZ2 237 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 LAIR1Q6GTX8 287 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 SDCCAG8Q86SQ7 713 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PARGQ86W56 976 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TRAPPC5Q8IUR0 188 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 LMNTD2Q8IXW0 634 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 RBFAQ8N0V3 343 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 MFSD2AQ8NA29 543 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 NAT14Q8WUY8 206 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 MRRFQ96E11 262 aaKnown RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 SGSM3Q96HU1 749 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 COX14Q96I36 57 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 BOCQ9BWV1 1114 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 IRF2BPLQ9H1B7 796 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 OR2AG1Q9H205 316 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TXNDC16Q9P2K2 825 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 KLQ9UEF7 1012 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 GMEB2Q9UKD1 530 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CNOT6Q9ULM6 557 aaKnown RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 TMEM98Q9Y2Y6 226 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 A0A1B0GVT2 93 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 EXOC1LA0A1B0GW35 172 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 TMEM202A6NGA9 273 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 FAM159BA6NKW6 160 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 AGAP14A8MT82 685 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 TOR1BO14657 336 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 MAGEC1O60732 1142 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ABHD2P08910 425 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 PBLDP30039 288 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 EIF3BP55884 814 aaKnown RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ITIH4Q14624 930 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 BRD3Q15059 726 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ENPP7Q6UWV6 458 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 RD3Q7Z3Z2 195 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 IQCHQ86VS3 1027 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 CNTN4Q8IWV2 1026 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 OR56A4Q8NGH8 313 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 GPR150Q8NGU9 434 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 C1orf216Q8TAB5 229 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 FAM174AQ8TBP5 190 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 SKA1Q96BD8 255 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ATXN7L3BQ96GX2 97 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 CLPBQ9H078 707 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ARRDC1-AS1Q9H2J1 176 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ACSS3Q9H6R3 686 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 FGF22Q9HCT0 170 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 MRPL40Q9NQ50 206 aaKnown RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 GPR27Q9NS67 375 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-227ENST00000498056 NSMCE4AQ9NXX6 385 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 VPS18Q9P253 973 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 FBXO5Q9UKT4 447 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 ANKRD12Q6UB98 2062 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 KNL1Q8NG31 2342 aa13.42□□□□□ -0.26
CPNE1-227ENST00000498056 PRSS38A1L453 326 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 OR2AG2A6NM03 316 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CXorf49A8MYA2 514 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-227ENST00000498056 PATE3B3GLJ2 98 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 TLR4O00206 839 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 VILLO15195 856 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 OR1I1O60431 355 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CDK14O94921 469 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF7P17097 686 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-227ENST00000498056 HOXD12P35452 270 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 HSD17B3P37058 310 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 GNPDA1P46926 289 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 POLD2P49005 469 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 NXPH1P58417 271 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 B4GALNT1Q00973 533 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 OVGP1Q12889 678 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 NAB1Q13506 487 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 TCEA2Q15560 299 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 KLHL38Q2WGJ6 581 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms